RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 CCDC151A5D8V7 595 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 CLCN6P51797 869 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 TMEM169Q96HH4 297 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 COPEO14579 308 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 MSH4O15457 936 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 CCDC144BQ3MJ40 725 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 CATSPER3Q86XQ3 398 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 ULK4Q96C45 1275 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 ZBTB18Q99592 522 aa13.55□□□□□ -0.24
NUP58-206ENST00000463407 HSPA8P11142 646 aaKnown RBP13.54□□□□□ -0.24
NUP58-206ENST00000463407 ODC1P11926 461 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 FMO5P49326 533 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 POU5F1BQ06416 359 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 GOLGA7BQ2TAP0 167 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
NUP58-206ENST00000463407 PPP1R9AQ9ULJ8 1098 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 CAV1Q03135 178 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 GTF2H3Q13889 308 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 TRIM68Q6AZZ1 485 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 CDR2LQ86X02 465 aaPredicted RBP13.54□□□□□ -0.24
NUP58-206ENST00000463407 MAML1Q92585 1016 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 KIFC3Q9BVG8 833 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 KLHL11Q9NVR0 708 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 EPS15L1Q9UBC2 864 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 NR1D1P20393 614 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 RPA1P27694 616 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 ART3Q13508 389 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 TDRD10Q5VZ19 366 aaKnown RBP13.54□□□□□ -0.24
NUP58-206ENST00000463407 DEFB128Q7Z7B8 93 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 GMCL1P1Q8NEA9 526 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.54□□□□□ -0.243e-14■■■■□ 26
NUP58-206ENST00000463407 ABI2Q9NYB9 513 aaPredicted RBP13.54□□□□□ -0.24
NUP58-206ENST00000463407 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 KRT14P02533 472 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 PDGFRAP16234 1089 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 TAF6P49848 677 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 LIG3P49916 1009 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 THEMIS2Q5TEJ8 643 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 FBXO41Q8TF61 875 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 Q9H521 79 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 LIMA1Q9UHB6 759 aaKnown RBP13.54□□□□□ -0.24
NUP58-206ENST00000463407 DOLKQ9UPQ8 538 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 TMEM247A6NEH6 219 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 HLA-DRAP01903 254 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 VTNP04004 478 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 ASAP3Q8TDY4 903 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 AK9Q5TCS8 1911 aa13.54□□□□□ -0.24
NUP58-206ENST00000463407 ATP9BO43861 1147 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 RHOBTB3O94955 611 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 USP50Q70EL3 339 aaPredicted RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 UBA3Q8TBC4 463 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 DPP3Q9NY33 737 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 H7C4K7 107 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 KRT38O76015 456 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 C10orf120Q5SQS8 335 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 USP33Q8TEY7 942 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 RFFLQ8WZ73 363 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 RMDN2Q96LZ7 410 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 TMEM60Q9H2L4 133 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 BFARQ9NZS9 450 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 HMGB1P1B2RPK0 211 aaPredicted RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 EIF3DO15371 548 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUP58-206ENST00000463407 GAS2O43903 313 aaKnown RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 HARS2P49590 506 aaKnown RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUP58-206ENST00000463407 GLRA4Q5JXX5 417 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 SLC7A14Q8TBB6 771 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 MIPOL1Q8TD10 442 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 SEPT8Q92599 483 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 TTC17Q96AE7 1141 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 EHD4Q9H223 541 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 VPS33BQ9H267 617 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 TAF6LQ9Y6J9 622 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 ITGB3P05106 788 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 SUPT20HL2P0C7V6 817 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 FAM133BQ5BKY9 247 aaKnown RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 ATPAF2Q8N5M1 289 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 HDAC6Q9UBN7 1215 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 EEF2KO00418 725 aaKnown RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 GRAP2O75791 330 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 PNPLA4P41247 253 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 EIF3EP60228 445 aaKnown RBP13.53□□□□□ -0.24
NUP58-206ENST00000463407 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUP58-206ENST00000463407 STK33Q9BYT3 514 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms