RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 MAPK6Q16659 721 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 SPRYD7Q5W111 196 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 ACAD10Q6JQN1 1059 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 ZBTB8OSQ8IWT0 167 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 ABRAQ8N0Z2 381 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 RUBCNQ92622 972 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 NLRP4Q96MN2 994 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.92□□□□□ -0.668e-8■■□□□ 14.1
MSH5-211ENST00000463144 TCHPQ9BT92 498 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 PLEKHA4Q9H4M7 779 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 VTA1Q9NP79 307 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 ERAP1Q9NZ08 941 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 NOC2LQ9Y3T9 749 aaKnown RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 NUB1Q9Y5A7 615 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 OGTO15294 1046 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 MTA2O94776 668 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 CYP1A2P05177 515 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 OAS2P29728 719 aaKnown RBP10.91□□□□□ -0.66
MSH5-211ENST00000463144 IGBP1P78318 339 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 CUL2Q13617 745 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 CLEC16AQ2KHT3 1053 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 MAP9Q49MG5 647 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 EEF1DP3Q658K8 133 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 C11orf63Q6NUN7 778 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 TSHZ1Q6ZSZ6 1077 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 GPR142Q7Z601 462 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 CDR2LQ86X02 465 aaPredicted RBP10.91□□□□□ -0.66
MSH5-211ENST00000463144 CPNE8Q86YQ8 564 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 KLHL7Q8IXQ5 586 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 AFG1LQ8WV93 481 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 ALG3Q92685 438 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 FAM81BQ96LP2 452 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 JPH2Q9BR39 696 aaPredicted RBP10.91□□□□□ -0.66
MSH5-211ENST00000463144 AP1M1Q9BXS5 423 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 C2orf40Q9H1Z8 148 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 GDF3Q9NR23 364 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 CPSF3Q9UKF6 684 aaKnown RBP10.91□□□□□ -0.66
MSH5-211ENST00000463144 ANK1P16157 1881 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 PGRMC1O00264 195 aaKnown RBP10.91□□□□□ -0.66
MSH5-211ENST00000463144 ACKR2O00590 384 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 RAD51CO43502 376 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 GH1P01241 217 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 CFHP08603 1231 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 UNGP13051 313 aaPredicted RBP10.91□□□□□ -0.66
MSH5-211ENST00000463144 ITGA4P13612 1032 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 PTENP60484 403 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 FKBP1BP68106 108 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 MBTD1Q05BQ5 628 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 TRADDQ15628 312 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 ZNF484Q5JVG2 852 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
MSH5-211ENST00000463144 LINC01465Q8N7H1 131 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 BTBD6Q96KE9 485 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 C16orf70Q9BSU1 422 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 IFT122Q9HBG6 1241 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 CNTN6Q9UQ52 1028 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 NR2E1Q9Y466 385 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 PCDHB2Q9Y5E7 798 aa10.91□□□□□ -0.66
MSH5-211ENST00000463144 INO80B-WBP1J3KQ70 363 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 HEXIM1O94992 359 aaKnown RBP10.9□□□□□ -0.66
MSH5-211ENST00000463144 CELF2O95319 508 aaKnown RBP10.9□□□□□ -0.66
MSH5-211ENST00000463144 CLTAP09496 248 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 ZNF286BP0CG31 522 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 TNFRSF8P28908 595 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 TNNT3P45378 269 aaPredicted RBP10.9□□□□□ -0.66
MSH5-211ENST00000463144 CARSP49589 748 aaKnown RBP10.9□□□□□ -0.66
MSH5-211ENST00000463144 GRM1Q13255 1194 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 NCOA4Q13772 614 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 GRB14Q14449 540 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 MESDQ14696 234 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 WDR49Q8IV35 697 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 CEP120Q8N960 986 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 PPTC7Q8NI37 304 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 NPLOC4Q8TAT6 608 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 KRT35Q92764 455 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
MSH5-211ENST00000463144 ZNF653Q96CK0 615 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 NUP85Q9BW27 656 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 INO80BQ9C086 356 aaPredicted RBP10.9□□□□□ -0.66
MSH5-211ENST00000463144 RRAGCQ9HB90 399 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 EPB41L5Q9HCM4 733 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 GTF3C4Q9UKN8 822 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 TTC7AQ9ULT0 858 aaPredicted RBP10.9□□□□□ -0.66
MSH5-211ENST00000463144 HPCAL4Q9UM19 191 aa10.9□□□□□ -0.66
MSH5-211ENST00000463144 ZSWIM8A7E2V4 1837 aa10.9□□□□□ -0.67
MSH5-211ENST00000463144 ESYT3A0FGR9 886 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 POLR3GO15318 223 aaPredicted RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 ASAP2O43150 1006 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 PHACTR2O75167 634 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 CSDE1O75534 798 aaKnown RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 COMTP21964 271 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 MARCKSL1P49006 195 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 TNNC1P63316 161 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 NOP14P78316 857 aaKnown RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 GUCY2DQ02846 1103 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 GABPB1Q06547 395 aaPredicted RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 ZNF211Q13398 564 aaPredicted RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 TFDP1Q14186 410 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 KCTD19Q17RG1 926 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms