RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-208	ENST00000463013	DCLRE1C	Q96SD1	692 aa	Known RBP	4.97	□□□□□ -1.61
KDM3A-208	ENST00000463013	PRRX2	Q99811	253 aa		4.97	□□□□□ -1.61
KDM3A-208	ENST00000463013	SERPINB13	Q9UIV8	391 aa		4.97	□□□□□ -1.61
KDM3A-208	ENST00000463013	LIMCH1	Q9UPQ0	1083 aa		4.97	□□□□□ -1.61
KDM3A-208	ENST00000463013	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.97	□□□□□ -1.61
KDM3A-208	ENST00000463013	CCDC154	A6NI56	674 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	AHRR	A9YTQ3	701 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	DIRC3	C9JPN6	131 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	SGTA	O43765	313 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	CDC42EP1	Q00587	391 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	NHLH2	Q02577	135 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	UAP1L1	Q3KQV9	507 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	C3orf36	Q3SXR2	165 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	FNDC7	Q5VTL7	733 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	LRCH2	Q5VUJ6	765 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	SEM1	Q6ZVN7	128 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	CMTR2	Q8IYT2	770 aa	Known RBP	4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	ZNF276	Q8N554	614 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	FAM193B	Q96PV7	902 aa	Predicted RBP	4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	TDP1	Q9NUW8	608 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	FAM30A	Q9NZY2	134 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	SLC23A1	Q9UHI7	598 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	RUVBL1	Q9Y265	456 aa	Known RBP	4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	CHST2	Q9Y4C5	530 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	PCDHA13	Q9Y5I0	950 aa		4.96	□□□□□ -1.62
KDM3A-208	ENST00000463013	DRGX	A6NNA5	263 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	ZSCAN20	P17040	1043 aa	Predicted RBP	4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	CHN2	P52757	468 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	RNASE9	P60153	205 aa	Known RBP	4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	IL10RA	Q13651	578 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	PPP4R3A	Q6IN85	833 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	ZNF529	Q6P280	563 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	GDF7	Q7Z4P5	450 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	RSPH3	Q86UC2	560 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	PLXDC1	Q8IUK5	500 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	MIER2	Q8N344	545 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	ZNF483	Q8TF39	744 aa	Predicted RBP	4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	RAB24	Q969Q5	203 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	MYOC	Q99972	504 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	SLC46A2	Q9BY10	475 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	SLC2A4RG	Q9NR83	387 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	GPRC5B	Q9NZH0	403 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	TRPM5	Q9NZQ8	1165 aa		4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	LUC7L2	Q9Y383	392 aa	Known RBP	4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	REXO2	Q9Y3B8	237 aa	Known RBP	4.95	□□□□□ -1.62
KDM3A-208	ENST00000463013	RAMP2	O60895	175 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	ALDH1L1	O75891	902 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	POMC	P01189	267 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	NR4A1	P22736	598 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	PTGS2	P35354	604 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	CTXN1	P60606	82 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	ATP2B3	Q16720	1220 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	DACT2	Q5SW24	774 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	METRNL	Q641Q3	311 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	CPA6	Q8N4T0	437 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	IFI44	Q8TCB0	444 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	KAT5	Q92993	513 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	TMX3	Q96JJ7	454 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	NEU1	Q99519	415 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	ZNF768	Q9H5H4	540 aa	Known RBP	4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	TCF7L1	Q9HCS4	588 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	AASDHPPT	Q9NRN7	309 aa		4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	CFAP20	Q9Y6A4	193 aa	Known RBP	4.94	□□□□□ -1.62
KDM3A-208	ENST00000463013	GAGE12B	A1L429	117 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	GAGE12H	A6NDE8	117 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	ZNF185	O15231	689 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	PPFIA4	O75335	1185 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	RPS6KA4	O75676	772 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	RPLP2	P05387	115 aa	Known RBP	4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	SPATA31D3	P0C874	917 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	ALAS1	P13196	640 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	FAM189B	P81408	668 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	CREM	Q03060	361 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	RAB39A	Q14964	217 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	UBXN2B	Q14CS0	331 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	TTF1	Q15361	905 aa	Predicted RBP	4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	PDCD4	Q53EL6	469 aa	Known RBP	4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	AGAP9	Q5VTM2	703 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	SPATA31D4	Q6ZUB0	917 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	MED25	Q71SY5	747 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	UBE3B	Q7Z3V4	1068 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	LDLRAD3	Q86YD5	345 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	RHOT2	Q8IXI1	618 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	HAS1	Q92839	578 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	LENG9	Q96B70	501 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	HOOK2	Q96ED9	719 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	PHACTR3	Q96KR7	559 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	MRGPRX4	Q96LA9	322 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	NRDE2	Q9H7Z3	1164 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	MMRN2	Q9H8L6	949 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	FBXO34	Q9NWN3	711 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	USP15	Q9Y4E8	981 aa	Predicted RBP	4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	PCDHB1	Q9Y5F3	818 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	DMRT1	Q9Y5R6	373 aa		4.93	□□□□□ -1.62
KDM3A-208	ENST00000463013	RNASET2	O00584	256 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms