RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 INCENPQ9NQS7 918 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 MCM9Q9NXL9 1143 aa8.52□□□□□ -1.05
UBE4B-204ENST00000462658 SMG5Q9UPR3 1016 aaKnown RBP8.52□□□□□ -1.05
UBE4B-204ENST00000462658 MAST2Q6P0Q8 1798 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 A0A087X0B3 334 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 TRAF5O00463 557 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 PSMD14O00487 310 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 PRC1O43663 620 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 RAD17O75943 681 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 VIL1P09327 827 aaKnown RBP8.51□□□□□ -1.05
UBE4B-204ENST00000462658 FLT3P36888 993 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 EPHA5P54756 1037 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 RHBDL3P58872 404 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 PCBP1Q15365 356 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBE4B-204ENST00000462658 CR1LQ2VPA4 569 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 CPZQ66K79 652 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 EP400NLQ6ZTU2 488 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 CHST3Q7LGC8 479 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 TRIM48Q8IWZ4 208 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 FBXL16Q8N461 479 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 C2orf69Q8N8R5 385 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 JDP2Q8WYK2 163 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 TOE1Q96GM8 510 aaKnown RBP8.51□□□□□ -1.05
UBE4B-204ENST00000462658 WNK4Q96J92 1243 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 SIGLEC10Q96LC7 697 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 KRT23Q9C075 422 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 USP40Q9NVE5 1235 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 DTLQ9NZJ0 730 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 CHMP5Q9NZZ3 219 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 RBPJLQ9UBG7 517 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 ARPP21Q9UBL0 812 aaPredicted RBP8.51□□□□□ -1.05
UBE4B-204ENST00000462658 TPCN1Q9ULQ1 816 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 FAN1Q9Y2M0 1017 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 NEDD4P46934 1319 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
UBE4B-204ENST00000462658 CYP2D7A0A087X1C5 515 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 FAM90A27PA6NNH2 459 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 LARGE1O95461 756 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 NPTXRO95502 500 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 LRG1P02750 347 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 SLC3A2P08195 630 aaKnown RBP8.5□□□□□ -1.05
UBE4B-204ENST00000462658 CYP2D6P10635 497 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 DDIT3P35638 169 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 TXKP42681 527 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 MECP2P51608 486 aaKnown RBP8.5□□□□□ -1.05
UBE4B-204ENST00000462658 RBM5P52756 815 aaKnown RBP eCLIP8.5□□□□□ -1.05
UBE4B-204ENST00000462658 ANTXR2P58335 489 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 ME3Q16798 604 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 SKOR2Q2VWA4 1001 aaPredicted RBP8.5□□□□□ -1.05
UBE4B-204ENST00000462658 RRP12Q5JTH9 1297 aaKnown RBP8.5□□□□□ -1.05
UBE4B-204ENST00000462658 BTBD8Q5XKL5 378 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 APOBEC3HQ6NTF7 200 aaKnown RBP8.5□□□□□ -1.05
UBE4B-204ENST00000462658 ZNF662Q6ZS27 426 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 CYB5R4Q7L1T6 521 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 STK32CQ86UX6 486 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 MAPKAPK5Q8IW41 473 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 AMOTL1Q8IY63 956 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 CPA5Q8WXQ8 436 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 AGXT2Q9BYV1 514 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 CD320Q9NPF0 282 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 TOMM22Q9NS69 142 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 NUB1Q9Y5A7 615 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 IRAK3Q9Y616 596 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 CEP350Q5VT06 3117 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 MYO3BQ8WXR4 1341 aa8.5□□□□□ -1.05
UBE4B-204ENST00000462658 SMIM22K7EJ46 135 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 ACOT7O00154 380 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 SCDO00767 359 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 KRT37O76014 449 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 TSPAN15O95858 294 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 C8AP07357 584 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 PCP11498 1178 aaKnown RBP8.49□□□□□ -1.05
UBE4B-204ENST00000462658 PI3P19957 117 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 CXCL9Q07325 125 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 STK3Q13188 491 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 SEC23AQ15436 765 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 PAN2Q504Q3 1202 aaKnown RBP8.49□□□□□ -1.05
UBE4B-204ENST00000462658 FIGNQ5HY92 759 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 C12orf60Q5U649 245 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 CIAPIN1Q6FI81 312 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 TEPPQ6URK8 271 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 B3GNT8Q7Z7M8 397 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 CCDC83Q8IWF9 413 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 NLGN4XQ8N0W4 816 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 NECAB1Q8N987 351 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 CHST14Q8NCH0 376 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 ESR2Q92731 530 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 NOX5Q96PH1 765 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 RIC8BQ9NVN3 520 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 SAP30BPQ9UHR5 308 aaKnown RBP8.49□□□□□ -1.05
UBE4B-204ENST00000462658 CNOT6Q9ULM6 557 aaKnown RBP8.49□□□□□ -1.05
UBE4B-204ENST00000462658 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.49□□□□□ -1.05
UBE4B-204ENST00000462658 ATP23Q9Y6H3 246 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 FLT1P17948 1338 aa8.49□□□□□ -1.05
UBE4B-204ENST00000462658 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.48□□□□□ -1.05
UBE4B-204ENST00000462658 SLC12A8A0AV02 714 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 NPIPB6E9PJ23 425 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 CBX4O00257 560 aa8.48□□□□□ -1.05
UBE4B-204ENST00000462658 SH2B2O14492 632 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms