RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 CEP120Q8N960 986 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 UBN1Q9NPG3 1134 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 ST3GAL5Q9UNP4 418 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 EFCAB14O75071 495 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 TPM1P09493 284 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 COPB1P53618 953 aaKnown RBP13.06□□□□□ -0.32
RAE1-207ENST00000462438 CHMP4BP1P59074 171 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 NR1I3Q14994 352 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 FILIP1LQ4L180 1135 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 REXO1L1PQ8IX06 675 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 HACE1Q8IYU2 909 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 PPM1EQ8WY54 764 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 RGS18Q9NS28 235 aa13.06□□□□□ -0.32
RAE1-207ENST00000462438 B4GALT5O43286 388 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 CLSTN1O94985 981 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 TIMP1P01033 207 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 MIIPQ5JXC2 388 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 ERGIC2Q96RQ1 377 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 TUBGCP2Q9BSJ2 902 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
RAE1-207ENST00000462438 HIPK3Q9H422 1215 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 PADI3Q9ULW8 664 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 KRT13P13646 458 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 ACTN2P35609 894 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 PBX1P40424 430 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 VWA3BQ502W6 1294 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 EEF1DP3Q658K8 133 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 GBP6Q6ZN66 633 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 UBXN4Q92575 508 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 N4BP2L2Q92802 583 aaPredicted RBP13.05□□□□□ -0.32
RAE1-207ENST00000462438 SLC35C1Q96A29 364 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 CENPHQ9H3R5 247 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
RAE1-207ENST00000462438 COQ4Q9Y3A0 265 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 CLIC2O15247 247 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 GPNMBQ14956 572 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 ALKAL1Q6UXT8 129 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 WDR49Q8IV35 697 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 PARD3BQ8TEW8 1205 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 CGRRF1Q99675 332 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
RAE1-207ENST00000462438 EME2A4GXA9 379 aaPredicted RBP13.04□□□□□ -0.32
RAE1-207ENST00000462438 PQBP1O60828 265 aaKnown RBP13.04□□□□□ -0.32
RAE1-207ENST00000462438 PAX3P23760 479 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 FIGNQ5HY92 759 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 SEPT8Q92599 483 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 AGO3Q9H9G7 860 aaKnown RBP13.04□□□□□ -0.32
RAE1-207ENST00000462438 EOMESO95936 686 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 CASP4P49662 377 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 CYP2J2P51589 502 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 VAMP7P51809 220 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 TMEM62Q0P6H9 643 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 HTATIP2Q9BUP3 242 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 CNTN3Q9P232 1028 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 CPSF2Q9P2I0 782 aaKnown RBP13.04□□□□□ -0.32
RAE1-207ENST00000462438 FBXL5Q9UKA1 691 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 GIT1Q9Y2X7 761 aa13.04□□□□□ -0.32
RAE1-207ENST00000462438 A0A0U1RQF3 1178 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 TTC26A0AVF1 554 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 TISP43B9A030 160 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 AFPP02771 609 aaKnown RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 ATP1A3P13637 1013 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 KCNE1P15382 129 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 CYP3A5P20815 502 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 ZBTB45Q96K62 511 aaPredicted RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 PIN4Q9Y237 131 aaKnown RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAE1-207ENST00000462438 NBNO60934 754 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 STAU1O95793 577 aaKnown RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 RFX1P22670 979 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 MTIF2P46199 727 aaKnown RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 ZNF75DP51815 510 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 GSCP56915 257 aaPredicted RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 C1orf220Q5T0J3 134 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 CNKSR3Q6P9H4 555 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 ZNF598Q86UK7 904 aaKnown RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 PPP1R13LQ8WUF5 828 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 PGBD4Q96DM1 585 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 SNX27Q96L92 541 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 FAM81BQ96LP2 452 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 IKZF4Q9H2S9 585 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 NDST4Q9H3R1 872 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 TOPORSQ9NS56 1045 aaPredicted RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
RAE1-207ENST00000462438 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.325e-6■■□□□ 11.9
RAE1-207ENST00000462438 BAIAP3O94812 1187 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 ECEL1O95672 775 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 STAG3L1P0CL83 205 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 MFSD5Q6N075 450 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 CBWD2Q8IUF1 395 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 TMEM8AQ9HCN3 771 aa13.03□□□□□ -0.32
RAE1-207ENST00000462438 TMEM39AQ9NV64 488 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms