RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 GOLGA6L6A8MZA4 724 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 C4BPAP04003 597 aaKnown RBP11.54□□□□□ -0.56
RTF1-202ENST00000462276 TMEM191BP0C7N4 346 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 CSF2RAP15509 400 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 RFX1P22670 979 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 TFAMQ00059 246 aaKnown RBP11.54□□□□□ -0.56
RTF1-202ENST00000462276 MYL7Q01449 175 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 FPGSQ05932 587 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 PPP3CAQ08209 521 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 TRIM14Q14142 442 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 ZBTB6Q15916 424 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 SEZ6Q53EL9 994 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 FIGNQ5HY92 759 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 C1orf220Q5T0J3 134 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 SPECC1LQ69YQ0 1117 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 C15orf39Q6ZRI6 1047 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 DEFB128Q7Z7B8 93 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 NPAS4Q8IUM7 802 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 FMNL3Q8IVF7 1028 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 CCDC150Q8NCX0 1101 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 FBXL13Q8NEE6 735 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 BEST2Q8NFU1 509 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 PLEKHO2Q8TD55 490 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 TAF4BQ92750 862 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 DPF3Q92784 378 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 RPS6KC1Q96S38 1066 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 LBHD1Q9BQE6 289 aaPredicted RBP11.54□□□□□ -0.56
RTF1-202ENST00000462276 TMEM117Q9H0C3 514 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 MTIF3Q9H2K0 278 aaKnown RBP11.54□□□□□ -0.56
RTF1-202ENST00000462276 RSAD1Q9HA92 442 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 PLCB1Q9NQ66 1216 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 IMPACTQ9P2X3 320 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 ITGA11Q9UKX5 1188 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 LRFN2Q9ULH4 789 aa11.54□□□□□ -0.56
RTF1-202ENST00000462276 SMIM28A0A1B0GU29 152 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 PHACTR2O75167 634 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 FGBP02675 491 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 AMHP03971 560 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 THP07101 528 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 TPM1P09493 284 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 TRIM49P0CI25 452 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 TRIM49CP0CI26 452 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 AKAP5P24588 427 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 ATICP31939 592 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 RPL9P32969 192 aaKnown RBP11.53□□□□□ -0.56
RTF1-202ENST00000462276 PBX1P40424 430 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 GCLMP48507 274 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 DLG4P78352 724 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 RBP5P82980 135 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 TRPC3Q13507 836 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 WDR44Q5JSH3 913 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 JADE1Q6IE81 842 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 PSRC1Q6PGN9 363 aaPredicted RBP11.53□□□□□ -0.56
RTF1-202ENST00000462276 AGMOQ6ZNB7 445 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 TRAPPC11Q7Z392 1133 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 VSTM4Q8IW00 320 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 TMEM192Q8IY95 271 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 C7orf61Q8IZ16 206 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 ABI1Q8IZP0 508 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 EHBP1Q8NDI1 1231 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 URGCPQ8TCY9 931 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 JAKMIP2Q96AA8 810 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
RTF1-202ENST00000462276 POP1Q99575 1024 aaKnown RBP11.53□□□□□ -0.56
RTF1-202ENST00000462276 IMPG2Q9BZV3 1241 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 FAM124BQ9H5Z6 455 aaPredicted RBP11.53□□□□□ -0.56
RTF1-202ENST00000462276 RAB20Q9NX57 234 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 FBXL5Q9UKA1 691 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 HES2Q9Y543 173 aa11.53□□□□□ -0.56
RTF1-202ENST00000462276 ARL5CA6NH57 179 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 TEX33O43247 280 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 AP5Z1O43299 807 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 OFD1O75665 1012 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 STAU1O95793 577 aaKnown RBP11.52□□□□□ -0.57
RTF1-202ENST00000462276 ATF7P17544 494 aaPredicted RBP11.52□□□□□ -0.57
RTF1-202ENST00000462276 ITGB8P26012 769 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 PNPLA4P41247 253 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 GRIK3Q13003 919 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 BIRC3Q13489 604 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 NCOA4Q13772 614 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 SYCP1Q15431 976 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 CBWD6Q4V339 395 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 NOMO2Q5JPE7 1267 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 CBWD3Q5JTY5 395 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 CBWD5Q5RIA9 395 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 ENOSF1Q7L5Y1 443 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 CRIPAKQ8N1N5 446 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 LRRC52Q8N7C0 313 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 LINC01599Q8WXQ3 324 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 ZNF516Q92618 1163 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 UROC1Q96N76 676 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 GAD1Q99259 594 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 APOL6Q9BWW8 343 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 MRPL9Q9BYD2 267 aaKnown RBP11.52□□□□□ -0.57
RTF1-202ENST00000462276 NUCKS1Q9H1E3 243 aaKnown RBP11.52□□□□□ -0.57
RTF1-202ENST00000462276 VRTNQ9H8Y1 702 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 DPP3Q9NY33 737 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms