RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 IKZF4Q9H2S9 585 aa11.53□□□□□ -0.56
TRAPPC12-213ENST00000461577 GOLPH3LQ9H4A5 285 aa11.53□□□□□ -0.56
TRAPPC12-213ENST00000461577 MRPL17Q9NRX2 175 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-213ENST00000461577 EXOC1Q9NV70 894 aa11.53□□□□□ -0.56
TRAPPC12-213ENST00000461577 STYXL1Q9Y6J8 313 aa11.53□□□□□ -0.56
TRAPPC12-213ENST00000461577 EYSQ5T1H1 3165 aa11.53□□□□□ -0.56
TRAPPC12-213ENST00000461577 SF3B1O75533 1304 aaKnown RBP eCLIP11.53□□□□□ -0.564e-8■■■■■ 68.9
TRAPPC12-213ENST00000461577 UBE4BO95155 1302 aa11.53□□□□□ -0.56
TRAPPC12-213ENST00000461577 TTC26A0AVF1 554 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 LACTBL1A8MY62 500 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 TULP1O00294 542 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 C2CD2LO14523 706 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 B3GAT3O94766 335 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 KIF4AO95239 1232 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 LDHAP00338 332 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 GARTP22102 1010 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 GLUD2P49448 558 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 ACOT2P49753 483 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 CLCNKBP51801 687 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 SPAG1Q07617 926 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 ELAVL2Q12926 359 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 PSMD2Q13200 908 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 COL19A1Q14993 1142 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 ENOX2Q16206 610 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 CTC1Q2NKJ3 1217 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 USP41Q3LFD5 358 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 LEXMQ3ZCV2 418 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 KMT5BQ4FZB7 885 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 TJAP1Q5JTD0 557 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 KANK3Q6NY19 840 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 ARMCX5Q6P1M9 558 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 KRBA2Q6ZNG9 492 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 TAS1R1Q7RTX1 841 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 CD302Q8IX05 232 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 GLIS3Q8NEA6 775 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 ZNF507Q8TCN5 953 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 NOC3LQ8WTT2 800 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 C18orf25Q96B23 403 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 GPR62Q9BZJ7 368 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 GOLGA2P5Q9HBQ8 144 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 SLC39A2Q9NP94 309 aa11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 CPSF3Q9UKF6 684 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC12-213ENST00000461577 H3BQ06 376 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 TMEM189-UBE2V1I3L0A0 370 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 PODXLO00592 558 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 MEFVO15553 781 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 TRAPPC3O43617 180 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 KLRC4O43908 158 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 FAM189A1O60320 539 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 CLASP2O75122 1294 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 RPN1P04843 607 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 KLRC2P26717 231 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 ADSSP30520 456 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 SOX4Q06945 474 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 EHHADHQ08426 723 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 UPP1Q16831 310 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 PUS10Q3MIT2 529 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 FAM171A1Q5VUB5 890 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 EPM2AIP1Q7L775 607 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 PPFIBP1Q86W92 1011 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 CEP57Q86XR8 500 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 NELFCDQ8IXH7 590 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 RNF168Q8IYW5 571 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 CASP10Q92851 521 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 SAAL1Q96ER3 474 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 TSPAN18Q96SJ8 248 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 FAM213AQ9BRX8 229 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 PCIF1Q9H4Z3 704 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 UBQLN1Q9UMX0 589 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 IRAK3Q9Y616 596 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 ANK1P16157 1881 aa11.51□□□□□ -0.57
TRAPPC12-213ENST00000461577 TCF20Q9UGU0 1960 aaKnown RBP11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 GOLGA8IPA6NC78 632 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 GOLGA8JA6NMD2 632 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 KIAA0391O15091 583 aaKnown RBP11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 TBX10O75333 385 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 IL18RAPO95256 599 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 GLP2RO95838 553 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 EFEMP2O95967 443 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 PRR29P0C7W0 189 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 LTBRP36941 435 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 KCNQ1P51787 676 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 DSG1Q02413 1049 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 CREMQ03060 361 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 FAM160A1Q05DH4 1040 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 DLX2Q07687 328 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 TMEM132DQ14C87 1099 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 CLUL1Q15846 466 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 KIAA0319Q5VV43 1072 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 JADE1Q6IE81 842 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 HS2ST1Q7LGA3 356 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 FMR1NBQ8N0W7 255 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 BEST2Q8NFU1 509 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 SCFD1Q8WVM8 642 aa11.5□□□□□ -0.57
TRAPPC12-213ENST00000461577 RIN2Q8WYP3 895 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms