RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 TAPT1Q6NXT6 567 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 IRF2BP2Q7Z5L9 587 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 TMC3Q7Z5M5 1100 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 VPS36Q86VN1 386 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 LRRC57Q8N9N7 239 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 ASAP3Q8TDY4 903 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 LMBR1Q8WVP7 490 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 TMEM206Q9H813 350 aa12.03□□□□□ -0.48
COPS7B-217ENST00000461350 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
COPS7B-217ENST00000461350 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.03□□□□□ -0.48
COPS7B-217ENST00000461350 H2AFZP0C0S5 128 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 SCTRP47872 440 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 TAF1CQ15572 869 aaPredicted RBP12.02□□□□□ -0.48
COPS7B-217ENST00000461350 H2AFVQ71UI9 128 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 ADAT2Q7Z6V5 191 aaKnown RBP12.02□□□□□ -0.48
COPS7B-217ENST00000461350 PLEKHH3Q7Z736 793 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 NPLOC4Q8TAT6 608 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 SLC7A3Q8WY07 619 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 SAAL1Q96ER3 474 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 SGSM3Q96HU1 749 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 TRIM51Q9BSJ1 452 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 BZW2Q9Y6E2 419 aaKnown RBP12.02□□□□□ -0.48
COPS7B-217ENST00000461350 BRCA2P51587 3418 aa12.02□□□□□ -0.48
COPS7B-217ENST00000461350 DCAF8L1A6NGE4 600 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 SMIM23A6NLE4 172 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 STRNO43815 780 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 SNAI1O95863 264 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-217ENST00000461350 DLG4P78352 724 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 PREPLQ4J6C6 727 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-217ENST00000461350 RGMBQ6NW40 437 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 U2AF1L4Q8WU68 220 aaKnown RBP12.02□□□□□ -0.49
COPS7B-217ENST00000461350 N4BP2L2Q92802 583 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-217ENST00000461350 ZNF668Q96K58 619 aaPredicted RBP12.02□□□□□ -0.49
COPS7B-217ENST00000461350 ZIC5Q96T25 663 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 SELENOSQ9BQE4 189 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 SLITRK6Q9H5Y7 841 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 DHX33Q9H6R0 707 aaKnown RBP12.02□□□□□ -0.49
COPS7B-217ENST00000461350 METTL14Q9HCE5 456 aaKnown RBP12.02□□□□□ -0.49
COPS7B-217ENST00000461350 NRBP2Q9NSY0 501 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 HSPBP1Q9NZL4 362 aa12.02□□□□□ -0.49
COPS7B-217ENST00000461350 TLDC2A0PJX2 215 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 LRRIQ4A6NIV6 560 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 BTNL10A8MVZ5 291 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 ADSSP30520 456 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 GRB14Q14449 540 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 TAS1R3Q7RTX0 852 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 TATDN2Q93075 761 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 HVCN1Q96D96 273 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 IFT74Q96LB3 600 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 NIFKQ9BYG3 293 aaKnown RBP12.01□□□□□ -0.49
COPS7B-217ENST00000461350 F8VZ95 297 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 FGGP02679 453 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 EZRP15311 586 aaKnown RBP12.01□□□□□ -0.49
COPS7B-217ENST00000461350 GLRA2P23416 452 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 CNGA1P29973 690 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 ELF1P32519 619 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 ALCAMQ13740 583 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 PRAMEF19Q5SWL8 479 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 SLC39A4Q6P5W5 647 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 GJB7Q6PEY0 223 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 LRRC71Q8N4P6 559 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 FMO2Q99518 471 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 ST6GALNAC4Q9H4F1 302 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 FAM114A2Q9NRY5 505 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 ARHGAP1Q07960 439 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 TARBP2Q15633 366 aaKnown RBP12.01□□□□□ -0.49
COPS7B-217ENST00000461350 NFIL3Q16649 462 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 CBWD6Q4V339 395 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 CBWD3Q5JTY5 395 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 CBWD5Q5RIA9 395 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 MAMDC4Q6UXC1 1216 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 CCDC50Q8IVM0 306 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 BICD1Q96G01 975 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 LRRC4CQ9HCJ2 640 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 GCNT4Q9P109 453 aa12.01□□□□□ -0.49
COPS7B-217ENST00000461350 TPX2Q9ULW0 747 aaKnown RBP12.01□□□□□ -0.49
COPS7B-217ENST00000461350 EVPLQ92817 2033 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 HNRNPDLO14979 420 aaKnown RBP12□□□□□ -0.49
COPS7B-217ENST00000461350 GJB1P08034 283 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 PON1P27169 355 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 RPAINQ86UA6 219 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 CBWD2Q8IUF1 395 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 MAP4K3Q8IVH8 894 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 SYCE1Q8N0S2 351 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 AFG1LQ8WV93 481 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 SPIRE2Q8WWL2 714 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 CHMP6Q96FZ7 201 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 NTPCRQ9BSD7 190 aaKnown RBP12□□□□□ -0.49
COPS7B-217ENST00000461350 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12□□□□□ -0.49
COPS7B-217ENST00000461350 MCM8Q9UJA3 840 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 ABT1Q9ULW3 272 aaKnown RBP12□□□□□ -0.49
COPS7B-217ENST00000461350 TRPC6Q9Y210 931 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 DIS3Q9Y2L1 958 aaKnown RBP12□□□□□ -0.49
COPS7B-217ENST00000461350 CEP350Q5VT06 3117 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 ZNF286BP0CG31 522 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 IGBP1P78318 339 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 SLC9A9Q8IVB4 645 aa12□□□□□ -0.49
COPS7B-217ENST00000461350 ABRAQ8N0Z2 381 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms