RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ALDH2P05091 517 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 PPM1AP35813 382 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 KCNQ1P51787 676 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 TUSC3Q13454 348 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 TIGD5Q53EQ6 642 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 CENPPQ6IPU0 288 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 KCNT2Q6UVM3 1135 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 EP400NLQ6ZTU2 488 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 COLGALT2Q8IYK4 626 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 PPP1R10Q96QC0 940 aaKnown RBP24.41■■□□□ 1.5
C9orf3-209ENST00000460573 C11orf84Q9BUA3 381 aaPredicted RBP24.41■■□□□ 1.5
C9orf3-209ENST00000460573 DMAC2Q9NW81 257 aa24.41■■□□□ 1.5
C9orf3-209ENST00000460573 LACTBL1A8MY62 500 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 BMP6P22004 513 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 RPL13P26373 211 aaKnown RBP24.4■■□□□ 1.5
C9orf3-209ENST00000460573 BCAR1P56945 870 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 EDRF1Q3B7T1 1238 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 CCDC183Q5T5S1 534 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 RBM43Q6ZSC3 357 aaKnown RBP24.4■■□□□ 1.5
C9orf3-209ENST00000460573 NT5DC4Q86YG4 428 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 BRSK2Q8IWQ3 736 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 SYAP1Q96A49 352 aaPredicted RBP24.4■■□□□ 1.5
C9orf3-209ENST00000460573 MRPL38Q96DV4 380 aaKnown RBP24.4■■□□□ 1.5
C9orf3-209ENST00000460573 TSG101Q99816 390 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 HCSTQ9UBK5 93 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 PLAGL2Q9UPG8 496 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 DERAQ9Y315 318 aa24.4■■□□□ 1.5
C9orf3-209ENST00000460573 GOLGA8IPA6NC78 632 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 GOLGA8JA6NMD2 632 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 H3BNC9 293 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 MEFVO15553 781 aaPredicted RBP24.39■■□□□ 1.49
C9orf3-209ENST00000460573 XPOTO43592 962 aaKnown RBP24.39■■□□□ 1.49
C9orf3-209ENST00000460573 EXOC3O60645 756 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 NR3C1P04150 777 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 GALTP07902 379 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 CYP2J2P51589 502 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 SURF1Q15526 300 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 NAB2Q15742 525 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 ZCWPW2Q504Y3 356 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 UROC1Q96N76 676 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 RBAKQ9NYW8 714 aaPredicted RBP24.39■■□□□ 1.49
C9orf3-209ENST00000460573 FAN1Q9Y2M0 1017 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 CITO14578 2027 aa24.39■■□□□ 1.49
C9orf3-209ENST00000460573 TDRD15B5MCY1 1934 aaKnown RBP24.38■■□□□ 1.49
C9orf3-209ENST00000460573 PPP1R3GB7ZBB8 358 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 CYP3A5P20815 502 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 CCNE1P24864 410 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 LRRC63Q05C16 580 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 SNRNP35Q16560 246 aaKnown RBP24.38■■□□□ 1.49
C9orf3-209ENST00000460573 KLHL40Q2TBA0 621 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 SKOR2Q2VWA4 1001 aaPredicted RBP24.38■■□□□ 1.49
C9orf3-209ENST00000460573 GLRA4Q5JXX5 417 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 FOXR2Q6PJQ5 311 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 MLKLQ8NB16 471 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 ZSWIM2Q8NEG5 633 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 NOC3LQ8WTT2 800 aaKnown RBP24.38■■□□□ 1.49
C9orf3-209ENST00000460573 FAM212AQ96EL1 285 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 KIF12Q96FN5 646 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 ZMAT2Q96NC0 199 aaKnown RBP24.38■■□□□ 1.49
C9orf3-209ENST00000460573 CXCL16Q9H2A7 254 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 SPG21Q9NZD8 308 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 DNAJB4Q9UDY4 337 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 UBQLN1Q9UMX0 589 aaKnown RBP24.38■■□□□ 1.49
C9orf3-209ENST00000460573 C2CD2Q9Y426 696 aa24.38■■□□□ 1.49
C9orf3-209ENST00000460573 CSPG5O95196 566 aa24.37■■□□□ 1.49
C9orf3-209ENST00000460573 PLCB3Q01970 1234 aa24.37■■□□□ 1.49
C9orf3-209ENST00000460573 SLC39A11Q8N1S5 342 aa24.37■■□□□ 1.49
C9orf3-209ENST00000460573 KLHL23Q8NBE8 558 aa24.37■■□□□ 1.49
C9orf3-209ENST00000460573 DDX27Q96GQ7 796 aaKnown RBP24.37■■□□□ 1.49
C9orf3-209ENST00000460573 COLEC11Q9BWP8 271 aa24.37■■□□□ 1.49
C9orf3-209ENST00000460573 STK39Q9UEW8 545 aa24.37■■□□□ 1.49
C9orf3-209ENST00000460573 FRMD4BQ9Y2L6 1034 aa24.37■■□□□ 1.49
C9orf3-209ENST00000460573 BICDL2A1A5D9 508 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 NRP1O14786 923 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 MAPK13O15264 365 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 B4GALT3O60512 393 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 CD44P16070 742 aaKnown RBP24.36■■□□□ 1.49
C9orf3-209ENST00000460573 NR2F2P24468 414 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 OR1G1P47890 313 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 SLC11A1P49279 550 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 KRT17Q04695 432 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 UBE3AQ05086 875 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 ADAM9Q13443 819 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 ZBTB6Q15916 424 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 CBWD2Q8IUF1 395 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 UBE2ZQ9H832 354 aaPredicted RBP24.36■■□□□ 1.49
C9orf3-209ENST00000460573 LZTS1Q9Y250 596 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 TRANK1O15050 2925 aa24.36■■□□□ 1.49
C9orf3-209ENST00000460573 KIAA1671Q9BY89 1806 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 FGF18O76093 207 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 BMP1P13497 986 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 RPL9P32969 192 aaKnown RBP24.35■■□□□ 1.49
C9orf3-209ENST00000460573 NLRP12P59046 1061 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 FKBP3Q00688 224 aaKnown RBP24.35■■□□□ 1.49
C9orf3-209ENST00000460573 TMEM132DQ14C87 1099 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 JADE1Q6IE81 842 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 RDH13Q8NBN7 331 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 BEST2Q8NFU1 509 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 CACTINQ8WUQ7 758 aaKnown RBP24.35■■□□□ 1.49
C9orf3-209ENST00000460573 TMEM169Q96HH4 297 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms