RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 AKAP5P24588 427 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 RPL9P32969 192 aaKnown RBP11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 ALDH7A1P49419 539 aaKnown RBP11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 VAMP7P51809 220 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 BFSP1Q12934 665 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 TMEM132DQ14C87 1099 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 CREBRFQ8IUR6 639 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 HERC6Q8IVU3 1022 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 ZC3H3Q8IXZ2 948 aaKnown RBP11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 FIBCD1Q8N539 461 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 SNX27Q96L92 541 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 MFSD14AQ96MC6 490 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 SAMD11Q96NU1 681 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 IMPG2Q9BZV3 1241 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 USP20Q9Y2K6 914 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 TTC26A0AVF1 554 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 GOLGA8IPA6NC78 632 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 TRIM49BA6NDI0 452 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 GOLGA8JA6NMD2 632 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 TBKBP1A7MCY6 615 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 PHACTR2O75167 634 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 OFD1O75665 1012 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 AKAP3O75969 853 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 ALDH2P05091 517 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 EDN1P05305 212 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 ADRB2P07550 413 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 CXCL8P10145 99 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 DLATP10515 647 aaKnown RBP11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 LAG3P18627 525 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 PPM1AP35813 382 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 MLH1P40692 756 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 PNPLA4P41247 253 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 MTIF2P46199 727 aaKnown RBP11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 MARSP56192 900 aaKnown RBP11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 CYP24A1Q07973 514 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 SHHQ15465 462 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 ENOX2Q16206 610 aaKnown RBP11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 SLC10A6Q3KNW5 377 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 XKR4Q5GH76 650 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 SPOUT1Q5T280 376 aaKnown RBP11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 RASIP1Q5U651 963 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 PRPF38BQ5VTL8 546 aaKnown RBP11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 TCERG1LQ5VWI1 586 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 AGMOQ6ZNB7 445 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 CBWD2Q8IUF1 395 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 LINC01599Q8WXQ3 324 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 CCDC127Q96BQ5 260 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 GAD1Q99259 594 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 TMEM175Q9BSA9 504 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 FUCA2Q9BTY2 467 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 OSBPL7Q9BZF2 842 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 INPP5FQ9Y2H2 1132 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 HES2Q9Y543 173 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 PCDHB12Q9Y5F1 795 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 PCDHA11Q9Y5I1 949 aa11.93□□□□□ -0.5
SMNDC1-203ENST00000460483 SMIM28A0A1B0GU29 152 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 TISP43B9A030 160 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 P4HA2O15460 535 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 FAM189A1O60320 539 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 P4HA1P13674 534 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 TRIM21P19474 475 aaKnown RBP11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 PMS1P54277 932 aaKnown RBP11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 EPHB4P54760 987 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 TFAMQ00059 246 aaKnown RBP11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 MYO1EQ12965 1108 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 TUSC3Q13454 348 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 TRPC3Q13507 836 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 DCAF17Q5H9S7 520 aaPredicted RBP11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 ALKAL1Q6UXT8 129 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 AOPEPQ8N6M6 819 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 HELQQ8TDG4 1101 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 PARD3BQ8TEW8 1205 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 FAM81BQ96LP2 452 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 ZNF560Q96MR9 790 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 CGRRF1Q99675 332 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 DUSP9Q99956 384 aaKnown RBP11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 ITGA11Q9UKX5 1188 aa11.92□□□□□ -0.5
SMNDC1-203ENST00000460483 LACTBL1A8MY62 500 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 KCNJ18B7U540 433 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 PES1O00541 588 aaKnown RBP11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 POMCP01189 267 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 NUDT7P0C024 238 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 FGFR1P11362 822 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 CLDN10P78369 228 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 DEFB103AP81534 67 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 RBP5P82980 135 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 SMAD3P84022 425 aaKnown RBP11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 KRT17Q04695 432 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 ELAVL2Q12926 359 aaKnown RBP11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 BIRC3Q13489 604 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 KCNJ12Q14500 433 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 MAN2A1Q16706 1144 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 SEZ6Q53EL9 994 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 TCP11X2Q5H9J9 407 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms