RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 INPPL1O15357 1258 aa10.62□□□□□ -0.71
EPB41-208ENST00000460378 RECQL4O94761 1208 aa10.62□□□□□ -0.71
EPB41-208ENST00000460378 MXI1P50539 228 aa10.62□□□□□ -0.71
EPB41-208ENST00000460378 ANTXR2P58335 489 aa10.62□□□□□ -0.71
EPB41-208ENST00000460378 CAMK4Q16566 473 aa10.62□□□□□ -0.71
EPB41-208ENST00000460378 C10orf120Q5SQS8 335 aa10.62□□□□□ -0.71
EPB41-208ENST00000460378 POLMQ9NP87 494 aaPredicted RBP10.62□□□□□ -0.71
EPB41-208ENST00000460378 GNL1P36915 607 aaPredicted RBP10.61□□□□□ -0.71
EPB41-208ENST00000460378 MFAP3P55082 362 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 PTPN14Q15678 1187 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 KLHDC9Q8NEP7 349 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 RAD54LQ92698 747 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 BLZF1Q9H2G9 400 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 CACNA1SQ13698 1873 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 ZBTB22O15209 634 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 SNHG28P0DPA3 235 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 HEATR6Q6AI08 1181 aaKnown RBP10.61□□□□□ -0.71
EPB41-208ENST00000460378 GOLGA6CA6NDK9 693 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 GOLGA6BA6NDN3 693 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 GOLGA6DP0CG33 693 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 TNFAIP3P21580 790 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 KIAA1755Q5JYT7 1200 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 INTS8Q75QN2 995 aaKnown RBP10.61□□□□□ -0.71
EPB41-208ENST00000460378 TRMT11Q7Z4G4 463 aaKnown RBP10.61□□□□□ -0.71
EPB41-208ENST00000460378 OTUD6BQ8N6M0 293 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 ACDQ96AP0 544 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 TRIM5Q9C035 493 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 ARGLU1Q9NWB6 273 aaPredicted RBP10.61□□□□□ -0.71
EPB41-208ENST00000460378 GOLGA6AQ9NYA3 693 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 APODP05090 189 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 GNSP15586 552 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 EXOSC10Q01780 885 aaKnown RBP10.61□□□□□ -0.71
EPB41-208ENST00000460378 WDR72Q3MJ13 1102 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 AASDHQ4L235 1098 aaPredicted RBP10.61□□□□□ -0.71
EPB41-208ENST00000460378 TMEM63BQ5T3F8 832 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 TSPY26PQ9H489 355 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 MAPK8IP1Q9UQF2 711 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 NR2F2P24468 414 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 PRPHP41219 470 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 SYCP2LQ5T4T6 812 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 ZNF384Q8TF68 577 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 CTAGE1Q96RT6 745 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 MAN1C1Q9NR34 630 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.61□□□□□ -0.716e-11■■■□□ 15.1
EPB41-208ENST00000460378 RASAL2Q9UJF2 1139 aa10.61□□□□□ -0.71
EPB41-208ENST00000460378 CCDC195A0A1B0GUA6 201 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 PDGFRBP09619 1106 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 GJC1P36383 396 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 KIAA1324Q6UXG2 1013 aaKnown RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 DAAM2Q86T65 1068 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 SLC7A14Q8TBB6 771 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 TRIM43BA6NCK2 446 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 NFATC1O95644 943 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 MYL1P05976 194 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 SYT1P21579 422 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 CDC25AP30304 524 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 RNASE9P60153 205 aaKnown RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 GRB10Q13322 594 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 ARHGAP44Q17R89 818 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 MAP3K21Q5TCX8 1036 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 LHX8Q68G74 356 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 SCYL2Q6P3W7 929 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 CTNNBL1Q8WYA6 563 aaPredicted RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 TAF4BQ92750 862 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 PGLYRP2Q96PD5 576 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 TSPAN18Q96SJ8 248 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 ELAC1Q9H777 363 aaKnown RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 FAM204AQ9H8W3 233 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 POLD4Q9HCU8 107 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 ATP9AO75110 1047 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 RTN3O95197 1032 aaPredicted RBP10.6□□□□□ -0.71
EPB41-208ENST00000460378 TNNT1P13805 278 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 WEE1P30291 646 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 ACOT2P49753 483 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 C17orf80Q9BSJ5 609 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 MIR1-1HGQ9H1L0 117 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 EPC1Q9H2F5 836 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 LIMD1Q9UGP4 676 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 RFXAPO00287 272 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 ABCB4P21439 1286 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 ITKQ08881 620 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 LPIN1Q14693 890 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 GPR158Q5T848 1215 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 KIAA0319LQ8IZA0 1049 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 SPC24Q8NBT2 197 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 TRPV1Q8NER1 839 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 CIPCQ9C0C6 399 aa10.6□□□□□ -0.71
EPB41-208ENST00000460378 THAP12O43422 761 aa10.59□□□□□ -0.71
EPB41-208ENST00000460378 STK10O94804 968 aaKnown RBP10.59□□□□□ -0.71
EPB41-208ENST00000460378 ADH1CP00326 375 aa10.59□□□□□ -0.71
EPB41-208ENST00000460378 USP17L7P0C7H9 530 aa10.59□□□□□ -0.71
EPB41-208ENST00000460378 ABHD15Q6UXT9 468 aa10.59□□□□□ -0.71
EPB41-208ENST00000460378 CYP2W1Q8TAV3 490 aa10.59□□□□□ -0.71
EPB41-208ENST00000460378 EMID1Q96A84 441 aaPredicted RBP10.59□□□□□ -0.71
EPB41-208ENST00000460378 NAGPAQ9UK23 515 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms