RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 WDR44Q5JSH3 913 aa19.39■□□□□ 0.7
HPS3-202ENST00000460120 VTI1AQ96AJ9 217 aa19.39■□□□□ 0.7
HPS3-202ENST00000460120 HAPLN2Q9GZV7 340 aa19.39■□□□□ 0.7
HPS3-202ENST00000460120 COQ4Q9Y3A0 265 aa19.39■□□□□ 0.7
HPS3-202ENST00000460120 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.69
HPS3-202ENST00000460120 A6NNZ2 444 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 FAM107AO95990 144 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 KRT17Q04695 432 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 STRN3Q13033 797 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 TUBB8Q3ZCM7 444 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 AGBL2Q5U5Z8 902 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 TMC2Q8TDI7 906 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 KAT2BQ92831 832 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 MTRF1LQ9UGC7 380 aaKnown RBP19.39■□□□□ 0.69
HPS3-202ENST00000460120 AGO2Q9UKV8 859 aaKnown RBP19.39■□□□□ 0.69
HPS3-202ENST00000460120 PCDHB4Q9Y5E5 795 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 DOCK5Q9H7D0 1870 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 PSME4Q14997 1843 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 MROH7Q68CQ1 1323 aa19.39■□□□□ 0.69
HPS3-202ENST00000460120 RGS16O15492 202 aaPredicted RBP19.38■□□□□ 0.69
HPS3-202ENST00000460120 ECEL1O95672 775 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 NSFP46459 744 aaKnown RBP19.38■□□□□ 0.69
HPS3-202ENST00000460120 SIX1Q15475 284 aaPredicted RBP19.38■□□□□ 0.69
HPS3-202ENST00000460120 PPP2R5EQ16537 467 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 MCPH1Q8NEM0 835 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 SPIRE2Q8WWL2 714 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 MAP3K20Q9NYL2 800 aaKnown RBP19.38■□□□□ 0.69
HPS3-202ENST00000460120 H0YHG0 523 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 DSG3P32926 999 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 IFNAR2P48551 515 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 ZNF394Q53GI3 561 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 ZBTB33Q86T24 672 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 USP37Q86T82 979 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 MCOLN2Q8IZK6 566 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 SAMD3Q8N6K7 520 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 SLC17A8Q8NDX2 589 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 DEPTORQ8TB45 409 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 FBXL18Q96ME1 805 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 UVRAGQ9P2Y5 699 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 PCYOX1Q9UHG3 505 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 R3HDM2Q9Y2K5 976 aaKnown RBP19.38■□□□□ 0.69
HPS3-202ENST00000460120 ZNF541Q9H0D2 1346 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 EDN1P05305 212 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 CD58P19256 250 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 ATP4AP20648 1035 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 SNRPFP62306 86 aaKnown RBP19.38■□□□□ 0.69
HPS3-202ENST00000460120 ABHD15Q6UXT9 468 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 REPS2Q8NFH8 660 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 MGARPQ8TDB4 240 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 RBAKQ9NYW8 714 aaPredicted RBP19.38■□□□□ 0.69
HPS3-202ENST00000460120 FBXO40Q9UH90 709 aa19.38■□□□□ 0.69
HPS3-202ENST00000460120 PASKQ96RG2 1323 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 CHN1P15882 459 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 ZNF280AP59817 542 aaPredicted RBP19.37■□□□□ 0.69
HPS3-202ENST00000460120 CALCOCO2Q13137 446 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 LONRF1Q17RB8 773 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 BRDTQ58F21 947 aaPredicted RBP19.37■□□□□ 0.69
HPS3-202ENST00000460120 MIS18BP1Q6P0N0 1132 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 CPLX4Q7Z7G2 160 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 HOOK3Q86VS8 718 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 PSPC1Q8WXF1 523 aaKnown RBP19.37■□□□□ 0.69
HPS3-202ENST00000460120 NTPCRQ9BSD7 190 aaKnown RBP19.37■□□□□ 0.69
HPS3-202ENST00000460120 ACAD9Q9H845 621 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 APOBEC3GQ9HC16 384 aaKnown RBP19.37■□□□□ 0.69
HPS3-202ENST00000460120 DDX20Q9UHI6 824 aaKnown RBP19.37■□□□□ 0.69
HPS3-202ENST00000460120 TTLL13PA6NNM8 815 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 PODXLO00592 558 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 MEFVO15553 781 aaPredicted RBP19.37■□□□□ 0.69
HPS3-202ENST00000460120 TRAPPC3O43617 180 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 MARK3P27448 753 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 CHKAP35790 457 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 ADCY1Q08828 1119 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 DRP2Q13474 957 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 ANKRD35Q8N283 1001 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 C1orf131Q8NDD1 294 aaKnown RBP19.37■□□□□ 0.69
HPS3-202ENST00000460120 OR5B17Q8NGF7 314 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 MSTO1Q9BUK6 570 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 AS3MTQ9HBK9 375 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 MLXIPLQ9NP71 852 aa19.37■□□□□ 0.69
HPS3-202ENST00000460120 FER1L6Q2WGJ9 1857 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 K7ERI5 159 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 EXTL3O43909 919 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 MTA2O94776 668 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 HSPA6P17066 643 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 EMC10Q5UCC4 262 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 DCAF15Q66K64 600 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 MMS22LQ6ZRQ5 1243 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 TEX13BQ9BXU2 312 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 ZNF302Q9NR11 478 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 ARHGAP28Q9P2N2 729 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 PI4K2BG5E9Z4 385 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 VNN1O95497 513 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 SUPT20HL2P0C7V6 817 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 GLRA2P23416 452 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 SF3B2Q13435 895 aaKnown RBP19.36■□□□□ 0.69
HPS3-202ENST00000460120 GNPTABQ3T906 1256 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 SUPT20HL1Q3ZLR7 823 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 KAZNQ674X7 775 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 TRPM4Q8TD43 1214 aa19.36■□□□□ 0.69
HPS3-202ENST00000460120 ACSF2Q96CM8 615 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms