RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 A0A087X0T9 212 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 GSTTP1A0A1W2PQM5 241 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 KCNK3O14649 394 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 FAM228BP0C875 321 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 TCF7P36402 384 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-203ENST00000460097 ACTR2P61160 394 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 KLHL30Q0D2K2 578 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 CPLX4Q7Z7G2 160 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 EEF2KMTQ96G04 330 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 ZNF317Q96PQ6 595 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-203ENST00000460097 PNMA5Q96PV4 448 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 HTATIP2Q9BUP3 242 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 LSM14BQ9BX40 385 aaKnown RBP16.92■□□□□ 0.3
CMTM3-203ENST00000460097 TEKT3Q9BXF9 490 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 GANQ9H2C0 597 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 CENPHQ9H3R5 247 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 CNOT8Q9UFF9 292 aaKnown RBP16.92■□□□□ 0.3
CMTM3-203ENST00000460097 STXBP5LQ9Y2K9 1186 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 PSMD10O75832 226 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 ATP6V1G2O95670 118 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 DRG2P55039 364 aaKnown RBP16.92■□□□□ 0.3
CMTM3-203ENST00000460097 KRT76Q01546 638 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 TRADDQ15628 312 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 CALCRLQ16602 461 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 TMEM266Q2M3C6 531 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 ODF2Q5BJF6 829 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 ZNF746Q6NUN9 644 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-203ENST00000460097 KLHL7Q8IXQ5 586 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 SLFN12Q8IYM2 578 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 HAS1Q92839 578 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 FAXDC2Q96IV6 333 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 RSRC1Q96IZ7 334 aaKnown RBP16.92■□□□□ 0.3
CMTM3-203ENST00000460097 TMEM109Q9BVC6 243 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 NOVA2Q9UNW9 492 aaKnown RBP16.92■□□□□ 0.3
CMTM3-203ENST00000460097 DOCK5Q9H7D0 1870 aa16.92■□□□□ 0.3
CMTM3-203ENST00000460097 ATG7O95352 703 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 CCNE2O96020 404 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 LGALS2P05162 132 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 ZNF286BP0CG31 522 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 ALADP13716 330 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 GBP1P32455 592 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 POLR2FP61218 127 aaKnown RBP16.91■□□□□ 0.3
CMTM3-203ENST00000460097 PSMC6P62333 389 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 IRX1P78414 480 aaPredicted RBP16.91■□□□□ 0.3
CMTM3-203ENST00000460097 POU5F1Q01860 360 aaKnown RBP16.91■□□□□ 0.3
CMTM3-203ENST00000460097 ITGA7Q13683 1181 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 ANKRD27Q96NW4 1050 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 C16orf70Q9BSU1 422 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 KATNAL1Q9BW62 490 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 RAB17Q9H0T7 212 aa16.91■□□□□ 0.3
CMTM3-203ENST00000460097 TECP42680 631 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 MMP13P45452 471 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 MAGOHP61326 146 aaKnown RBP16.9■□□□□ 0.3
CMTM3-203ENST00000460097 ZNF268Q14587 947 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-203ENST00000460097 LRRC26Q2I0M4 334 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 SPRED3Q2MJR0 410 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 EDRF1Q3B7T1 1238 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 C1orf53Q5VUE5 145 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 ABHD15Q6UXT9 468 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 CEP57Q86XR8 500 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 MAGOHBQ96A72 148 aaKnown RBP16.9■□□□□ 0.3
CMTM3-203ENST00000460097 SEZ6LQ9BYH1 1024 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 NOD2Q9HC29 1040 aa16.9■□□□□ 0.3
CMTM3-203ENST00000460097 UTP11Q9Y3A2 253 aaKnown RBP16.9■□□□□ 0.3
CMTM3-203ENST00000460097 NOC2LQ9Y3T9 749 aaKnown RBP16.9■□□□□ 0.3
CMTM3-203ENST00000460097 H3BRB1 525 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 ARVCFO00192 962 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 F2P00734 622 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 TMOD1P28289 359 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 CLNS1AP54105 237 aaKnown RBP16.89■□□□□ 0.3
CMTM3-203ENST00000460097 ZKSCAN8Q15776 578 aaPredicted RBP16.89■□□□□ 0.3
CMTM3-203ENST00000460097 NBPF20Q3BBV1 942 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 HYIQ5T013 277 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 MIS18BP1Q6P0N0 1132 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 TPCN2Q8NHX9 752 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 UBLCP1Q8WVY7 318 aaPredicted RBP16.89■□□□□ 0.3
CMTM3-203ENST00000460097 GLG1Q92896 1179 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 CDK5RAP3Q96JB5 506 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 NEUROG2Q9H2A3 272 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 UNC45AQ9H3U1 944 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 SMARCAD1Q9H4L7 1026 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 TUT1Q9H6E5 874 aaKnown RBP16.89■□□□□ 0.3
CMTM3-203ENST00000460097 AZI2Q9H6S1 392 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 NLRC4Q9NPP4 1024 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.89■□□□□ 0.31e-6■■■■□ 20.6
CMTM3-203ENST00000460097 PCDHA12Q9UN75 941 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 PCDHA10Q9Y5I2 948 aa16.89■□□□□ 0.3
CMTM3-203ENST00000460097 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.89■□□□□ 0.3
CMTM3-203ENST00000460097 FAM187AA6NFU0 413 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 CCDC169A6NNP5 214 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 WDR64B1ANS9 1081 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 KRIT1O00522 736 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 LIN7AO14910 233 aaPredicted RBP16.89■□□□□ 0.29
CMTM3-203ENST00000460097 CEP104O60308 925 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 PSEN2P49810 448 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 CDK7P50613 346 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 MFSD10Q14728 455 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 SNX17Q15036 470 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 KRT71Q3SY84 523 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 IRF2BP2Q7Z5L9 587 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms