RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ADGRA3Q8IWK6 1321 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 CARNS1A5YM72 827 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 LRRC53A6NM62 1247 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 LRRIQ3A6PVS8 624 aaPredicted RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 B4GALT5O43286 388 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 AP5Z1O43299 807 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIF5CO60282 957 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 B4GALT4O60513 344 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 CSDE1O75534 798 aaKnown RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 GFPT2O94808 682 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 GYPCP04921 128 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 THP07101 528 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 ACTN1P12814 892 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 SELPP16109 830 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 SLC9A1P19634 815 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 IBSPP21815 317 aaPredicted RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 ADSSP30520 456 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 SOX5P35711 763 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 SLC8A3P57103 927 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 ADAM17P78536 824 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZNF200P98182 395 aaPredicted RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 RNASELQ05823 741 aaKnown RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 TBX2Q13207 712 aaPredicted RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 NCOA4Q13772 614 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZNF699Q32M78 642 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 SV2AQ7L0J3 742 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 METTL23Q86XA0 190 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 RPUSD2Q8IZ73 545 aaKnown RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 LINC01465Q8N7H1 131 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 RNF169Q8NCN4 708 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 U2AF1L4Q8WU68 220 aaKnown RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 DDX27Q96GQ7 796 aaKnown RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 CALR3Q96L12 384 aaKnown RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 ALS2CR12Q96Q35 445 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 DNAJC7Q99615 494 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 IFIH1Q9BYX4 1025 aaKnown RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 MIS12Q9H081 205 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 TMEM117Q9H0C3 514 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 CDT1Q9H211 546 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 ADAMTS10Q9H324 1103 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 PDZD7Q9H5P4 517 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 NHEJ1Q9H9Q4 299 aaPredicted RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 PAK6Q9NQU5 681 aaPredicted RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 INTS13Q9NVM9 706 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 DPP3Q9NY33 737 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 PUF60Q9UHX1 559 aaKnown RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 ST3GAL5Q9UNP4 418 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 C2CD2Q9Y426 696 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 PCDHB7Q9Y5E2 793 aa6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 EPN1Q9Y6I3 576 aaPredicted RBP6.28□□□□□ -1.4
RNU1-88P-201ENST00000459274 SSU72P8A0A1W2PR75 194 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 ANKRD62A6NC57 917 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 LACTBL1A8MY62 500 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TISP43B9A030 160 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRAPPC3O43617 180 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 PQBP1O60828 265 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 HUS1O60921 280 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 EFCAB14O75071 495 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 NDUFA10O95299 355 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 EOMESO95936 686 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 HLA-DRAP01903 254 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 HSPA1AP0DMV8 641 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 HSPA1BP0DMV9 641 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 CXCL8P10145 99 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 GHRP10912 638 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 COL6A1P12109 1028 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 CKBP12277 381 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 FGFR4P22455 802 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 PROZP22891 400 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 PBX1P40424 430 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 FXR1P51114 621 aaKnown RBP eCLIP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 DLG4P78352 724 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 GCNT1Q02742 428 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 IKBKEQ14164 716 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 BMS1Q14692 1282 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 DRAP1Q14919 205 aaPredicted RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 WDR72Q3MJ13 1102 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZACNQ401N2 412 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SV2CQ496J9 727 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SEZ6Q53EL9 994 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 CCDC122Q5T0U0 273 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SLC39A4Q6P5W5 647 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 PDXDC1Q6P996 788 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 GLB1LQ6UWU2 654 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SLC39A5Q6ZMH5 540 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SLC24A5Q71RS6 500 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 LRRC8DQ7L1W4 858 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TAS1R3Q7RTX0 852 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 APTXQ7Z2E3 356 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRAPPC11Q7Z392 1133 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 CDR2LQ86X02 465 aaPredicted RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TMEM199Q8N511 208 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TC2NQ8N9U0 490 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 KIF18AQ8NI77 898 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZNF592Q92610 1267 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZBTB10Q96DT7 871 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRIM11Q96F44 468 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 BORCS6Q96GS4 357 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms