RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ZBTB5O15062 677 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 EFSO43281 561 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ATP9BO43861 1147 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 LRRN2O75325 713 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 GPR32O75388 356 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ECI2O75521 394 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 CSPG5O95196 566 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 GALTP07902 379 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 CNPP09543 421 aaKnown RBP2.42□□□□□ -2.02
NEDD1-204ENST00000457368 FGFR1P11362 822 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 MYCLP12524 364 aaPredicted RBP2.42□□□□□ -2.02
NEDD1-204ENST00000457368 CEACAM1P13688 526 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 NID1P14543 1247 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 SCNN1AP37088 669 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 RAP1GAPP47736 663 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ALDH7A1P49419 539 aaKnown RBP2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ATP1A2P50993 1020 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 GPC5P78333 572 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 PLCB4Q15147 1175 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 USH1GQ495M9 461 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ZNF484Q5JVG2 852 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 SPECC1Q5M775 1068 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 STPG1Q5TH74 334 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 MTHFD1LQ6UB35 978 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 CAPN12Q6ZSI9 719 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 PDZD3Q86UT5 571 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ZNF280BQ86YH2 543 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 SIRT2Q8IXJ6 389 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 TMEM40Q8WWA1 233 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ZCCHC14Q8WYQ9 949 aaKnown RBP2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ZC3H10Q96K80 434 aaKnown RBP2.42□□□□□ -2.02
NEDD1-204ENST00000457368 MEGF10Q96KG7 1140 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 RPS6KC1Q96S38 1066 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 VN1R3Q9BXE9 311 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 NT5C3AQ9H0P0 336 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 RIOX1Q9H6W3 641 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 CHST12Q9NRB3 414 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ZDHHC3Q9NYG2 299 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 FNIP2Q9P278 1114 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 UBIAD1Q9Y5Z9 338 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 NUMBLQ9Y6R0 609 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ZMYM2Q9UBW7 1377 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 C5orf42Q9H799 3197 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 ZFYVE26Q68DK2 2539 aa2.42□□□□□ -2.02
NEDD1-204ENST00000457368 K7ESF4 209 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 HBP1O60381 514 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 RANBP6O60518 1105 aaKnown RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 PPP1R11O60927 126 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 SIN3BO75182 1162 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 MICAL2O94851 1124 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 CFBP00751 764 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 SOD2P04179 222 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 APPP05067 770 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 HNRNPA1P09651 372 aaKnown RBP eCLIP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 GBP2P32456 591 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 NLRP12P59046 1061 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 FGD1P98174 961 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 MTAPQ13126 283 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 AAMPQ13685 434 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 SIM2Q14190 667 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 UTP14CQ5TAP6 766 aaKnown RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 ZNF852Q6ZMS4 543 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 PRR23BQ6ZRT6 265 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 PROSER1Q86XN7 944 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 ABI1Q8IZP0 508 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 ZNF295-AS1Q8N0V1 137 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 SPEM1Q8N4L4 309 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 FEZF2Q8TBJ5 459 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 SMG7Q92540 1137 aaKnown RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 PLD4Q96BZ4 506 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 RNF41Q9H4P4 317 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 KANSL3Q9P2N6 904 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 MTF2Q9Y483 593 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 TELO2Q9Y4R8 837 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 TTC41PQ6P2S7 1318 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 CCDC195A0A1B0GUA6 201 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 PALM3A6NDB9 673 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 H0Y626 953 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 DDX3YO15523 660 aaKnown RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 TRIM16O95361 564 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 SMARCA1P28370 1054 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 SEC13P55735 322 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 CDC42EP1Q00587 391 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 DSG1Q02413 1049 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 CREMQ03060 361 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 LBRQ14739 615 aaKnown RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 NKAPLQ5M9Q1 402 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 MRPL10Q7Z7H8 261 aaKnown RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 TMEM173Q86WV6 379 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 STK11IPQ8N1F8 1099 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 SYNPOQ8N3V7 929 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 BCL7CQ8WUZ0 217 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 NACC1Q96RE7 527 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 UBA5Q9GZZ9 404 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 FAM49AQ9H0Q0 323 aaPredicted RBP2.41□□□□□ -2.02
NEDD1-204ENST00000457368 ADAMTS10Q9H324 1103 aa2.41□□□□□ -2.02
NEDD1-204ENST00000457368 NRDE2Q9H7Z3 1164 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms