RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SPPL3Q8TCT6 385 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 BCL7CQ8WUZ0 217 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-215ENST00000457039 IGSF21Q96ID5 467 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 TSPAN18Q96SJ8 248 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 CDX2Q99626 313 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-215ENST00000457039 PAAF1Q9BRP4 392 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 KIAA1586Q9HCI6 787 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 SLC38A7Q9NVC3 462 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 RBAKQ9NYW8 714 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-215ENST00000457039 SPG21Q9NZD8 308 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 CACNG4Q9UBN1 327 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 CASTOR2A6NHX0 329 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 GRM6O15303 877 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 CALUO43852 315 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-215ENST00000457039 IL18RAPO95256 599 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 NR3C1P04150 777 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 NFICP08651 508 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 POU3F3P20264 500 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-215ENST00000457039 PPP1R2P41236 205 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 CYP2J2P51589 502 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 SPAG1Q07617 926 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 CAMK1Q14012 370 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 SNRNP35Q16560 246 aaKnown RBP15.35■□□□□ 0.05
SMPD4-215ENST00000457039 EDRF1Q3B7T1 1238 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 C18orf25Q96B23 403 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-215ENST00000457039 KIF12Q96FN5 646 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 GOLGA2P5Q9HBQ8 144 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 ALG13Q9NP73 1137 aaKnown RBP15.35■□□□□ 0.05
SMPD4-215ENST00000457039 FAN1Q9Y2M0 1017 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 DERAQ9Y315 318 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 C2CD2Q9Y426 696 aa15.35■□□□□ 0.05
SMPD4-215ENST00000457039 PLXNA4Q9HCM2 1894 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 ZNF233A6NK53 670 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 F8W810 466 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 EXOC3O60645 756 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 CYP3A5P20815 502 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 DNAJB1P25685 340 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 OR1G1P47890 313 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 CLCNKBP51801 687 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 PMS1P54277 932 aaKnown RBP15.34■□□□□ 0.05
SMPD4-215ENST00000457039 UBE3AQ05086 875 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 UPP1Q16831 310 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 JADE1Q6IE81 842 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 CD300LGQ6UXG3 332 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 ZC3H3Q8IXZ2 948 aaKnown RBP15.34■□□□□ 0.05
SMPD4-215ENST00000457039 EFCAB13Q8IY85 973 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 RNF168Q8IYW5 571 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-215ENST00000457039 TMEM130Q8N3G9 435 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 DHTKD1Q96HY7 919 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-215ENST00000457039 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 UROC1Q96N76 676 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 VN1R3Q9BXE9 311 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 TUBGCP4Q9UGJ1 667 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 UBQLN1Q9UMX0 589 aaKnown RBP15.34■□□□□ 0.05
SMPD4-215ENST00000457039 LZTS1Q9Y250 596 aa15.34■□□□□ 0.05
SMPD4-215ENST00000457039 PRG3Q9Y2Y8 225 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-215ENST00000457039 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-215ENST00000457039 TRIM49BA6NDI0 452 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 TMEM189-UBE2V1I3L0A0 370 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 PSMA7O14818 248 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 NR2F2P24468 414 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 IGFBP6P24592 240 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-215ENST00000457039 CCNE1P24864 410 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 LRPAP1P30533 357 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 CYP24A1Q07973 514 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 STIM1Q13586 685 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 HSP90AA2PQ14568 343 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-215ENST00000457039 TMEM132DQ14C87 1099 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 SPATA1Q5VX52 437 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 ANKRD40Q6AI12 368 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 FOXR2Q6PJQ5 311 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 NT5DC4Q86YG4 428 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 RDH13Q8NBN7 331 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 C3orf58Q8NDZ4 430 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 NOC3LQ8WTT2 800 aaKnown RBP15.33■□□□□ 0.04
SMPD4-215ENST00000457039 POF1BQ8WVV4 589 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 MYLIPQ8WY64 445 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 RABGGTAQ92696 567 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 TMEM169Q96HH4 297 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 COLEC11Q9BWP8 271 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 LMAN2LQ9H0V9 348 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-215ENST00000457039 PDE11AQ9HCR9 933 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 LMCD1Q9NZU5 365 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 TMEM63CQ9P1W3 806 aa15.33■□□□□ 0.04
SMPD4-215ENST00000457039 PODXLO00592 558 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 MAPK13O15264 365 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 XPOTO43592 962 aaKnown RBP15.32■□□□□ 0.04
SMPD4-215ENST00000457039 AKAP3O75969 853 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 KIF4AO95239 1232 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 RPL9P32969 192 aaKnown RBP15.32■□□□□ 0.04
SMPD4-215ENST00000457039 CASP4P49662 377 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 KRT17Q04695 432 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 LRRC63Q05C16 580 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 PSMD6Q15008 389 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 SURF1Q15526 300 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 CCDC183Q5T5S1 534 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 DDX53Q86TM3 631 aaKnown RBP15.32■□□□□ 0.04
SMPD4-215ENST00000457039 PLEKHO2Q8TD55 490 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms