RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ASAP3Q8TDY4 903 aa19.68■□□□□ 0.74
SEMA3B-209ENST00000456560 CEP89Q96ST8 783 aa19.68■□□□□ 0.74
SEMA3B-209ENST00000456560 PORCNQ9H237 461 aa19.68■□□□□ 0.74
SEMA3B-209ENST00000456560 EPB41L4BQ9H329 900 aa19.68■□□□□ 0.74
SEMA3B-209ENST00000456560 DHX33Q9H6R0 707 aaKnown RBP19.68■□□□□ 0.74
SEMA3B-209ENST00000456560 C1orf112Q9NSG2 853 aa19.68■□□□□ 0.74
SEMA3B-209ENST00000456560 SSC5DA1L4H1 1573 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 SRRM3A6NNA2 597 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 POLGP54098 1239 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 RWDD2BP57060 319 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 STXBP2Q15833 593 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 CRELD2Q6UXH1 353 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 CYFIP1Q7L576 1253 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 ZNF677Q86XU0 584 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 ARFGAP2Q8N6H7 521 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 TRPM4Q8TD43 1214 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 TMEM143Q96AN5 459 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 HAPLN2Q9GZV7 340 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 EPN3Q9H201 632 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 AVENQ9NQS1 362 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 ZNF302Q9NR11 478 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 ATP8A1Q9Y2Q0 1164 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 SIP14410 1827 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 NDUFAB1O14561 156 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 HLA-DRAP01903 254 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 OATP04181 439 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 RARAP10276 462 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 SCP2P22307 547 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 GLRA2P23416 452 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 ARL2P36404 184 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 COILP38432 576 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 NLRP11P59045 1033 aaKnown RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 FSTL1Q12841 308 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 PTGISQ16647 500 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 SH3D19Q5HYK7 790 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 CCDC137Q6PK04 289 aaKnown RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 SUGP1Q8IWZ8 645 aaKnown RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 MCOLN2Q8IZK6 566 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 C12orf50Q8NA57 414 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 DNERQ8NFT8 737 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 CENPHQ9H3R5 247 aa19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 AGO2Q9UKV8 859 aaKnown RBP19.67■□□□□ 0.74
SEMA3B-209ENST00000456560 IGKV6D-21A0A0A0MT36 114 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 GBP1P32455 592 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 RPL21P46778 160 aaKnown RBP19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 PLTPP55058 493 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 EIF3BP55884 814 aaKnown RBP19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 STRN3Q13033 797 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 TDRD10Q5VZ19 366 aaKnown RBP19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 LMBRD2Q68DH5 695 aaPredicted RBP19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 CHST13Q8NET6 341 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 FBXO25Q8TCJ0 367 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 KAT2BQ92831 832 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 RUNDC3BQ96NL0 473 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 NIFKQ9BYG3 293 aaKnown RBP19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 LRRC4CQ9HCJ2 640 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 MTUS1Q9ULD2 1270 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 PCDHB2Q9Y5E7 798 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 SBF1O95248 1867 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 SOCS7O14512 581 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 VNN1O95497 513 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 NAMPTP43490 491 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 CNTN2Q02246 1040 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 WDR44Q5JSH3 913 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 SLC12A6Q9UHW9 1150 aa19.66■□□□□ 0.74
SEMA3B-209ENST00000456560 PTPRJQ12913 1337 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 FSCN2O14926 492 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 CYP1A1P04798 512 aaPredicted RBP19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 NUDT17P0C025 328 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 ACO1P21399 889 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 HPDP32754 393 aaPredicted RBP19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 ACOT2P49753 483 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 BPIFB4P59827 614 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 C9orf131Q5VYM1 1079 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 B4GALNT4Q76KP1 1039 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 FNBP1Q96RU3 617 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 PPP2R3BQ9Y5P8 575 aa19.65■□□□□ 0.74
SEMA3B-209ENST00000456560 WDR90Q96KV7 1748 aa19.64■□□□□ 0.74
SEMA3B-209ENST00000456560 TNNI1P19237 187 aa19.64■□□□□ 0.74
SEMA3B-209ENST00000456560 PMS2P54278 862 aa19.64■□□□□ 0.74
SEMA3B-209ENST00000456560 PDE4CQ08493 712 aa19.64■□□□□ 0.74
SEMA3B-209ENST00000456560 SLFN12LQ6IEE8 588 aa19.64■□□□□ 0.74
SEMA3B-209ENST00000456560 ZBTB45Q96K62 511 aaPredicted RBP19.64■□□□□ 0.74
SEMA3B-209ENST00000456560 PABPC3Q9H361 631 aaKnown RBP19.64■□□□□ 0.74
SEMA3B-209ENST00000456560 LRRC19Q9H756 370 aa19.64■□□□□ 0.74
SEMA3B-209ENST00000456560 MROH7Q68CQ1 1323 aa19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 DDNO94850 711 aaPredicted RBP19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 MYBL1P10243 752 aa19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 FNTAP49354 379 aa19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 KRT71Q3SY84 523 aa19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.64■□□□□ 0.731e-12■□□□□ 9.5
SEMA3B-209ENST00000456560 DEPTORQ8TB45 409 aa19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 GGA3Q9NZ52 723 aa19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 PARP2Q9UGN5 583 aa19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 ANAPC7Q9UJX3 599 aa19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 NOVA2Q9UNW9 492 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-209ENST00000456560 K7ERI5 159 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 MAPK4P31152 587 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 CENPCQ03188 943 aa19.63■□□□□ 0.73
SEMA3B-209ENST00000456560 SPOPLQ6IQ16 392 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms