RNA–Protein interactions for RNA: ENST00000456339.5

BRD2-206, Transcript of bromodomain containing 2, humanhuman

TSL 4

Gene BRD2, Length 887 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-206ENST00000456339 TRAPPC3O43617 180 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 CLCNKBP51801 687 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 GPC5P78333 572 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 NTHL1P78549 312 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 GNL2Q13823 731 aaKnown RBP16.5■□□□□ 0.23
BRD2-206ENST00000456339 GLRA4Q5JXX5 417 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 POLD4Q9HCU8 107 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 KCNH3Q9ULD8 1083 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
BRD2-206ENST00000456339 KIAA1024Q9UPX6 916 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 BACE2Q9Y5Z0 518 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 ZNF292O60281 2723 aa16.5■□□□□ 0.23
BRD2-206ENST00000456339 SMIM28A0A1B0GU29 152 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 DCNP07585 359 aaKnown RBP16.49■□□□□ 0.23
BRD2-206ENST00000456339 YARSP54577 528 aaKnown RBP16.49■□□□□ 0.23
BRD2-206ENST00000456339 XKR4Q5GH76 650 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 CD300LGQ6UXG3 332 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 ANKS3Q6ZW76 656 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 C1orf210Q8IVY1 113 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 IGSF22Q8N9C0 903 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 ST13P5Q8NFI4 369 aaPredicted RBP16.49■□□□□ 0.23
BRD2-206ENST00000456339 PJA1Q8NG27 643 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 DDX27Q96GQ7 796 aaKnown RBP16.49■□□□□ 0.23
BRD2-206ENST00000456339 RAB34Q9BZG1 259 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 TMEM134Q9H6X4 195 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 PTPRHQ9HD43 1115 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 TOPORSQ9NS56 1045 aaPredicted RBP16.49■□□□□ 0.23
BRD2-206ENST00000456339 CDY1Q9Y6F8 540 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 MYH11P35749 1972 aa16.49■□□□□ 0.23
BRD2-206ENST00000456339 PHLPP2Q6ZVD8 1323 aa16.48■□□□□ 0.23
BRD2-206ENST00000456339 LMNAP02545 664 aaKnown RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 IGFBP6P24592 240 aaPredicted RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 TKTP29401 623 aaKnown RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 GRM5P41594 1212 aa16.48■□□□□ 0.23
BRD2-206ENST00000456339 PABPC1LQ4VXU2 614 aaKnown RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
BRD2-206ENST00000456339 ALKAL1Q6UXT8 129 aa16.48■□□□□ 0.23
BRD2-206ENST00000456339 RSPO2Q6UXX9 243 aaPredicted RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 C3orf58Q8NDZ4 430 aa16.48■□□□□ 0.23
BRD2-206ENST00000456339 ITFG1Q8TB96 612 aa16.48■□□□□ 0.23
BRD2-206ENST00000456339 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 ACO2Q99798 780 aaKnown RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 DDX23Q9BUQ8 820 aaKnown RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 SLC38A7Q9NVC3 462 aa16.48■□□□□ 0.23
BRD2-206ENST00000456339 DNMT3BQ9UBC3 853 aaKnown RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
BRD2-206ENST00000456339 EP300Q09472 2414 aaPredicted RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 PDCD11Q14690 1871 aaKnown RBP16.48■□□□□ 0.23
BRD2-206ENST00000456339 CCDC169A6NNP5 214 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 SEC24BO95487 1268 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.232e-54■■■□□ 19
BRD2-206ENST00000456339 NPTX2P47972 431 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 PEX3P56589 373 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 PFKPQ01813 784 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 PRKCQQ04759 706 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 DMP1Q13316 513 aaPredicted RBP16.47■□□□□ 0.23
BRD2-206ENST00000456339 SLC8B1Q6J4K2 584 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 ZC3H14Q6PJT7 736 aaKnown RBP16.47■□□□□ 0.23
BRD2-206ENST00000456339 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 FAM184AQ8NB25 1140 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 ZNF461Q8TAF7 563 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 SNX29Q8TEQ0 813 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
BRD2-206ENST00000456339 FOXQ1Q9C009 403 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 CDT1Q9H211 546 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 C17orf75Q9HAS0 396 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 GOLGA2P5Q9HBQ8 144 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 AVENQ9NQS1 362 aaPredicted RBP16.47■□□□□ 0.23
BRD2-206ENST00000456339 SH2B1Q9NRF2 756 aaPredicted RBP16.47■□□□□ 0.23
BRD2-206ENST00000456339 HCFC1R1Q9NWW0 138 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 ARHGAP28Q9P2N2 729 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 RBM19Q9Y4C8 960 aaKnown RBP16.47■□□□□ 0.23
BRD2-206ENST00000456339 PATJQ8NI35 1801 aa16.47■□□□□ 0.23
BRD2-206ENST00000456339 KANSL1LA0AUZ9 987 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 I3L4J1 428 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 LAD1O00515 517 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 SP9P0CG40 484 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 GLULP15104 373 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 BRCC3P46736 316 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 TOB1P50616 345 aaPredicted RBP16.46■□□□□ 0.23
BRD2-206ENST00000456339 SOX4Q06945 474 aaPredicted RBP16.46■□□□□ 0.23
BRD2-206ENST00000456339 PTGDRQ13258 359 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 SNW1Q13573 536 aaKnown RBP16.46■□□□□ 0.23
BRD2-206ENST00000456339 NBR1Q14596 966 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 ZNF568Q3ZCX4 644 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 SLC44A4Q53GD3 710 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 KRT79Q5XKE5 535 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 ERMP1Q7Z2K6 904 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 DAW1Q8N136 415 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 CEP120Q8N960 986 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 DRC1Q96MC2 740 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 OSBPL6Q9BZF3 934 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 GDE1Q9NZC3 331 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 MRPS23Q9Y3D9 190 aaKnown RBP16.46■□□□□ 0.23
BRD2-206ENST00000456339 R4GN57 208 aa16.46■□□□□ 0.23
BRD2-206ENST00000456339 FRYLO94915 3013 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms