RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ZNF365Q70YC5 407 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 RNF169Q8NCN4 708 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 ZNF516Q92618 1163 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 GAD1Q99259 594 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 TMEM8AQ9HCN3 771 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 INTS13Q9NVM9 706 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 IFNKQ9P0W0 207 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 PCDHB7Q9Y5E2 793 aa17.96■□□□□ 0.47
CCDC90B-202ENST00000455220 SMIM28A0A1B0GU29 152 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 ARL5CA6NH57 179 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 PTGESO14684 152 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 P4HA2O15460 535 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 N4BP1O75113 896 aaKnown RBP17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 OFD1O75665 1012 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 FGBP02675 491 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 WDR5P61964 334 aaKnown RBP17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 TMEM132DQ14C87 1099 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 ZBTB6Q15916 424 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 CBWD6Q4V339 395 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 CBWD3Q5JTY5 395 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 CLLU1OSQ5K130 101 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 CBWD5Q5RIA9 395 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 LMBRD2Q68DH5 695 aaPredicted RBP17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 OR5B17Q8NGF7 314 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 ZFP42Q96MM3 310 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 LBHD1Q9BQE6 289 aaPredicted RBP17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 XPO4Q9C0E2 1151 aaKnown RBP17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 TMEM117Q9H0C3 514 aa17.96■□□□□ 0.46
CCDC90B-202ENST00000455220 CEP290O15078 2479 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 GTPBP10A4D1E9 387 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 CBFA2T2O43439 604 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 C4BPAP04003 597 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 GCLMP48507 274 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 MXI1P50539 228 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 AFF1P51825 1210 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 DUOXA2Q1HG44 320 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 ZACNQ401N2 412 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 KRT39Q6A163 491 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 SV2AQ7L0J3 742 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 RSPH1Q8WYR4 309 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 KIF12Q96FN5 646 aa17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 PPP1R10Q96QC0 940 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC90B-202ENST00000455220 HOXA2O43364 376 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 AMHP03971 560 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 IBSPP21815 317 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 TFAMQ00059 246 aaKnown RBP17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 PLCB2Q00722 1185 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 NAB2Q15742 525 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 GLRA4Q5JXX5 417 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 GLB1LQ6UWU2 654 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 OTOP2Q7RTS6 562 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 CACTINQ8WUQ7 758 aaKnown RBP17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 HERVK_113Q902F9 699 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 TOP1MTQ969P6 601 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 ANKRD36BP1Q96IX9 119 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 FAM84AQ96KN4 292 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 RPS6KC1Q96S38 1066 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 TRIM5Q9C035 493 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 MTMR12Q9C0I1 747 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 MIOSQ9NXC5 875 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 LRFN2Q9ULH4 789 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 UBQLN1Q9UMX0 589 aaKnown RBP17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 PLAGL2Q9UPG8 496 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 COQ4Q9Y3A0 265 aa17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-202ENST00000455220 PES1O00541 588 aaKnown RBP17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 TEX33O43247 280 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 TPM3P06753 285 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 TMEM191BP0C7N4 346 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 FGFR1P11362 822 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 CYP3A5P20815 502 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 RGS19P49795 217 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 SCNN1GP51170 649 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 DEFB103AP81534 67 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 MYL7Q01449 175 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 FKBP15Q5T1M5 1219 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 TDRD10Q5VZ19 366 aaKnown RBP17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 TRAPPC11Q7Z392 1133 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 HELQQ8TDG4 1101 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 ERGIC2Q96RQ1 377 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 MMRN2Q9H8L6 949 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 TNRC18O15417 2968 aaPredicted RBP17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 PTPRSQ13332 1948 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 COL4A6Q14031 1691 aa17.93■□□□□ 0.46
CCDC90B-202ENST00000455220 TDRD15B5MCY1 1934 aaKnown RBP17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 FNDC1Q4ZHG4 1894 aaPredicted RBP17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 XPOTO43592 962 aaKnown RBP17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 TNNC2P02585 160 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 THP07101 528 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 PBX1P40424 430 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 ZNF75DP51815 510 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 UBXN1Q04323 297 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 GRIK3Q13003 919 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 EPC2Q52LR7 807 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 C1orf127Q8N9H9 656 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 CXorf38Q8TB03 319 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 MRFAP1L1Q96HT8 127 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 SLC38A7Q9NVC3 462 aa17.92■□□□□ 0.46
CCDC90B-202ENST00000455220 A0A1W2PQC6 194 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms