RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 TRADDQ15628 312 aa23.06■■□□□ 1.28
SH3D21-201ENST00000453908 ADAT2Q7Z6V5 191 aaKnown RBP23.06■■□□□ 1.28
SH3D21-201ENST00000453908 CPNE8Q86YQ8 564 aa23.06■■□□□ 1.28
SH3D21-201ENST00000453908 TMEM59LQ9UK28 342 aa23.06■■□□□ 1.28
SH3D21-201ENST00000453908 FAM189A1O60320 539 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 GRIN3BO60391 1043 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 GTF2A2P52657 109 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 TMEM132AQ24JP5 1023 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 C2CD6Q53TS8 623 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 PHLDB2Q86SQ0 1253 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 CCDC102AQ96A19 550 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 DDX47Q9H0S4 455 aaKnown RBP23.05■■□□□ 1.28
SH3D21-201ENST00000453908 MINDY3Q9H8M7 445 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 DIS3Q9Y2L1 958 aaKnown RBP23.05■■□□□ 1.28
SH3D21-201ENST00000453908 IVNS1ABPQ9Y6Y0 642 aa23.05■■□□□ 1.28
SH3D21-201ENST00000453908 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.04■■□□□ 1.28
SH3D21-201ENST00000453908 KRIT1O00522 736 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 HBP1O60381 514 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 SND1Q7KZF4 910 aaKnown RBP eCLIP23.04■■□□□ 1.28
SH3D21-201ENST00000453908 ENOSF1Q7L5Y1 443 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 THNSL1Q8IYQ7 743 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 AENQ8WTP8 325 aaKnown RBP23.04■■□□□ 1.28
SH3D21-201ENST00000453908 AFG1LQ8WV93 481 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 IFT81Q8WYA0 676 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 ALG3Q92685 438 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 NUP85Q9BW27 656 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 MTMR12Q9C0I1 747 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 ERAP1Q9NZ08 941 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 NUB1Q9Y5A7 615 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 FGGP02679 453 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 LGALS2P05162 132 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 MARCKSL1P49006 195 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 CARSP49589 748 aaKnown RBP23.04■■□□□ 1.28
SH3D21-201ENST00000453908 TNNC1P63316 161 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 NOP14P78316 857 aaKnown RBP23.04■■□□□ 1.28
SH3D21-201ENST00000453908 AADACL2Q6P093 401 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 CEP120Q8N960 986 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 KRT35Q92764 455 aa23.04■■□□□ 1.28
SH3D21-201ENST00000453908 GAS2O43903 313 aaKnown RBP23.03■■□□□ 1.28
SH3D21-201ENST00000453908 CST3P01034 146 aaPredicted RBP23.03■■□□□ 1.28
SH3D21-201ENST00000453908 INSRRP14616 1297 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 CUL2Q13617 745 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 NCOA4Q13772 614 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 GLE1Q53GS7 698 aaKnown RBP23.03■■□□□ 1.28
SH3D21-201ENST00000453908 BRSK2Q8IWQ3 736 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 CPA5Q8WXQ8 436 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 GBA2Q9HCG7 927 aaPredicted RBP23.03■■□□□ 1.28
SH3D21-201ENST00000453908 ZC3H4Q9UPT8 1303 aaKnown RBP23.03■■□□□ 1.28
SH3D21-201ENST00000453908 CFHP08603 1231 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 SLC26A2P50443 739 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 TMEM270Q6UE05 265 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 MAMDC4Q6UXC1 1216 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 ZNF564Q8TBZ8 553 aaPredicted RBP23.03■■□□□ 1.28
SH3D21-201ENST00000453908 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.03■■□□□ 1.28
SH3D21-201ENST00000453908 HPCAL4Q9UM19 191 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 PPME1Q9Y570 386 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 PCDHB4Q9Y5E5 795 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 PLXNA1Q9UIW2 1896 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 PLXNB2O15031 1838 aa23.03■■□□□ 1.28
SH3D21-201ENST00000453908 IQCF3P0C7M6 154 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 LLGL2Q6P1M3 1020 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 PASD1Q8IV76 773 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 RASGEF1CQ8N431 466 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 NFU1Q9UMS0 254 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 NR2E1Q9Y466 385 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 ABLIM1O14639 778 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 CELF2O95319 508 aaKnown RBP23.02■■□□□ 1.28
SH3D21-201ENST00000453908 C22orf31O95567 290 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 COMTP21964 271 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 FAM193AP78312 1265 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 CLEC16AQ2KHT3 1053 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 ZNF568Q3ZCX4 644 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 EEF1DP3Q658K8 133 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 DPP9Q86TI2 863 aa23.02■■□□□ 1.28
SH3D21-201ENST00000453908 RNPC3Q96LT9 517 aaKnown RBP23.02■■□□□ 1.28
SH3D21-201ENST00000453908 OGTO15294 1046 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 ACO1P21399 889 aaKnown RBP23.01■■□□□ 1.27
SH3D21-201ENST00000453908 LAMC2Q13753 1193 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 ACAD10Q6JQN1 1059 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 GPR142Q7Z601 462 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 GTF3C2Q8WUA4 911 aaPredicted RBP23.01■■□□□ 1.27
SH3D21-201ENST00000453908 PTPN18Q99952 460 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 CNOT8Q9UFF9 292 aaKnown RBP23.01■■□□□ 1.27
SH3D21-201ENST00000453908 PCDHB2Q9Y5E7 798 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 SART1O43290 800 aaKnown RBP23.01■■□□□ 1.27
SH3D21-201ENST00000453908 SNAI1O95863 264 aaPredicted RBP23.01■■□□□ 1.27
SH3D21-201ENST00000453908 GH1P01241 217 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 CLTAP09496 248 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 HADHBP55084 474 aaKnown RBP23.01■■□□□ 1.27
SH3D21-201ENST00000453908 GPS2Q13227 327 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 ATF7IP2Q5U623 682 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 IFT20Q8IY31 132 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 RIN2Q8WYP3 895 aaPredicted RBP23.01■■□□□ 1.27
SH3D21-201ENST00000453908 C2orf40Q9H1Z8 148 aa23.01■■□□□ 1.27
SH3D21-201ENST00000453908 TFAMQ00059 246 aaKnown RBP23■■□□□ 1.27
SH3D21-201ENST00000453908 MCL1Q07820 350 aa23■■□□□ 1.27
SH3D21-201ENST00000453908 C11orf63Q6NUN7 778 aa23■■□□□ 1.27
SH3D21-201ENST00000453908 TMEM192Q8IY95 271 aa23■■□□□ 1.27
SH3D21-201ENST00000453908 EXOC8Q8IYI6 725 aa23■■□□□ 1.27
SH3D21-201ENST00000453908 TMEM130Q8N3G9 435 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms