RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 FNDC1Q4ZHG4 1894 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 PDXKO00764 312 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 PSMA7O14818 248 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 CALUO43852 315 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 PRPF6O94906 941 aaKnown RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 EDN1P05305 212 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 PRKCSHP14314 528 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 LAG3P18627 525 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 RPL13P26373 211 aaKnown RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 BTG3Q14201 252 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 NFIL3Q16649 462 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 SKOR2Q2VWA4 1001 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 NOMO2Q5JPE7 1267 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 EEF1DP3Q658K8 133 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 FAM109BQ6ICB4 259 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 ARMCX5Q6P1M9 558 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 SLC9A9Q8IVB4 645 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 FIBCD1Q8N539 461 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 KIAA0895Q8NCT3 520 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 ARMC2Q8NEN0 867 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 POMGNT1Q8WZA1 660 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 TIFAQ96CG3 184 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 MRGPRX2Q96LB1 330 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 ACAP3Q96P50 834 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 PLVAPQ9BX97 442 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 PBX4Q9BYU1 374 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 NXF3Q9H4D5 531 aaKnown RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 SLC28A3Q9HAS3 691 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 SLC38A7Q9NVC3 462 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 STK39Q9UEW8 545 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 AGO2Q9UKV8 859 aaKnown RBP9.49□□□□□ -0.89
COL28A1-205ENST00000453441 RALGAPA2Q2PPJ7 1873 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 GBF1Q92538 1859 aa9.49□□□□□ -0.89
COL28A1-205ENST00000453441 TTC24A2A3L6 582 aaPredicted RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 ARL5CA6NH57 179 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 TBKBP1A7MCY6 615 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 XPOTO43592 962 aaKnown RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 EXTL3O43909 919 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 OFD1O75665 1012 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 RECQL4O94761 1208 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 RB1P06400 928 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 PPM1AP35813 382 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 SH3BP2P78314 561 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 LRRC63Q05C16 580 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 GRIK3Q13003 919 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 MORC3Q14149 939 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 SURF1Q15526 300 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 EDRF1Q3B7T1 1238 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 XKR4Q5GH76 650 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 CT47A1Q5JQC4 288 aaPredicted RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 HABP4Q5JVS0 413 aaKnown RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 CLLU1OSQ5K130 101 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 CCDC183Q5T5S1 534 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 FAM117BQ6P1L5 589 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 AGMOQ6ZNB7 445 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 USP37Q86T82 979 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 NT5DC4Q86YG4 428 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 MLKLQ8NB16 471 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 GPT2Q8TD30 523 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 HELQQ8TDG4 1101 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 BAP1Q92560 729 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 CLP1Q92989 425 aaKnown RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 HPS3Q969F9 1004 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 DHTKD1Q96HY7 919 aaPredicted RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 CASD1Q96PB1 797 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 FAM193BQ96PV7 902 aaPredicted RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 TGS1Q96RS0 853 aaKnown RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 TSG101Q99816 390 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 TMEM175Q9BSA9 504 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 FGFBP2Q9BYJ0 223 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 ASB7Q9H672 318 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 RPF1Q9H9Y2 349 aaKnown RBP9.48□□□□□ -0.89
COL28A1-205ENST00000453441 AGPAT3Q9NRZ7 376 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 RNF19AQ9NV58 838 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 SNTG2Q9NY99 539 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 PARP2Q9UGN5 583 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 MAN1B1Q9UKM7 699 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 TRAF3IP3Q9Y228 551 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 DERAQ9Y315 318 aa9.48□□□□□ -0.89
COL28A1-205ENST00000453441 TDRD15B5MCY1 1934 aaKnown RBP9.47□□□□□ -0.89
COL28A1-205ENST00000453441 BICDL2A1A5D9 508 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 LINC01553A4QN01 128 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 ANKRD63C9JTQ0 380 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 TGFB1I1O43294 461 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 FAM189A1O60320 539 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
COL28A1-205ENST00000453441 IL18RAPO95256 599 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 CA3P07451 260 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 ADRB2P07550 413 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 FGFR1P11362 822 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 KCNE1P15382 129 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 PAX3P23760 479 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 HOXD13P35453 343 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 MLH1P40692 756 aa9.47□□□□□ -0.89
COL28A1-205ENST00000453441 RNASELQ05823 741 aaKnown RBP9.47□□□□□ -0.89
COL28A1-205ENST00000453441 PPP2R3AQ06190 1150 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms