RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 ACER1Q8TDN7 264 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 SDCCAG3Q96C92 435 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 UNC45AQ9H3U1 944 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 PREX2Q70Z35 1606 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 CTSHP09668 335 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 DHX34Q14147 1143 aaKnown RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 TTMPQ5BVD1 217 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 INTS5Q6P9B9 1019 aaKnown RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 ZNF571Q7Z3V5 609 aaPredicted RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 SLC25A41Q8N5S1 370 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 ZKSCAN4Q969J2 545 aaPredicted RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 TAAR1Q96RJ0 339 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 PCDHAC2Q9Y5I4 1007 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 RCCD1A6NED2 376 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 H3BRJ5 948 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 KCNN4O15554 427 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 MAGEA4P43358 317 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 RPS6P62753 249 aaKnown RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 PKN1Q16512 942 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 NCLNQ969V3 563 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 TMA16Q96EY4 203 aaKnown RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 MTMR4Q9NYA4 1195 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 L3MBTL1Q9Y468 752 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 PITPNM2Q9BZ72 1349 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 PDE2AO00408 941 aaPredicted RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 PDXKO00764 312 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 WEE2P0C1S8 567 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 SCTRP47872 440 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 LRRC8EQ6NSJ5 796 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 TSSK1BQ9BXA7 367 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 ZNF302Q9NR11 478 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 INTS13Q9NVM9 706 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 POLIQ9UNA4 740 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 RASSF10A6NK89 507 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 GJB6O95452 261 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 FAM107AO95990 144 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 PAX7P23759 505 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 BRD2P25440 801 aaKnown RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 HSP90AA5PQ58FG0 334 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 KCNT1Q5JUK3 1230 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 RAB44Q7Z6P3 723 aaPredicted RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 PRUNE1Q86TP1 453 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 CATSPER3Q86XQ3 398 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 DHX38Q92620 1227 aaKnown RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 STAMBPL1Q96FJ0 436 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 NUDT12Q9BQG2 462 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 METTL5Q9NRN9 209 aaKnown RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 RBAKQ9NYW8 714 aaPredicted RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 IP6K2Q9UHH9 426 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 HECW2Q9P2P5 1572 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 RALAP11233 206 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 VEGFAP15692 232 aaPredicted RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 QARSP47897 775 aaKnown RBP8.19□□□□□ -1.1
RIF1-206ENST00000453091 COPS2P61201 443 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 TPCN2Q8NHX9 752 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 RHBDL2Q9NX52 303 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 POLLQ9UGP5 575 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 SPDYE2BA6NHP3 402 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 SPDYE6P0CI01 402 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 ZNF543Q08ER8 600 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 FBXL13Q8NEE6 735 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 AP5M1Q9H0R1 490 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 IL1RL2Q9HB29 575 aa8.19□□□□□ -1.1
RIF1-206ENST00000453091 AIM2O14862 343 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 ENO3P13929 434 aaPredicted RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 DPEP1P16444 411 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 ANGPTL8Q6UXH0 198 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 TMEM237Q96Q45 408 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 TUBB6Q9BUF5 446 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 SIK2Q9H0K1 926 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 AURKCQ9UQB9 309 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 CEP170BQ9Y4F5 1589 aaPredicted RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 ATL2Q8NHH9 583 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 HNRNPLLQ8WVV9 542 aaKnown RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 SGF29Q96ES7 293 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 MTRQ99707 1265 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 INO80Q9ULG1 1556 aaPredicted RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 LAMC1P11047 1609 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 USP31Q70CQ4 1352 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 SSU72P8A0A1W2PR75 194 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 UBOX5O94941 541 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 YWHABP31946 246 aaKnown RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 GNL1P36915 607 aaPredicted RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 IFI35P80217 286 aaPredicted RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 KCNMA1Q12791 1236 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 COBLL1Q53SF7 1204 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 AGBL2Q5U5Z8 902 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 FAM160B2Q86V87 743 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 FAM71DQ8N9W8 422 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 RBBP8NLQ8NC74 664 aaPredicted RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 ARMC2Q8NEN0 867 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 PDCD6IPQ8WUM4 868 aaKnown RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 DNAJC9Q8WXX5 260 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 PWWP2AQ96N64 755 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 ERP44Q9BS26 406 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 ZNF70Q9UC06 446 aaPredicted RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 XPO7Q9UIA9 1087 aaKnown RBP8.18□□□□□ -1.1
RIF1-206ENST00000453091 SYNDIG1LA6NDD5 238 aa8.18□□□□□ -1.1
RIF1-206ENST00000453091 FOXN3O00409 490 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms