RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 F2RL2O00254 374 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 KIAA0391O15091 583 aaKnown RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 GRM6O15303 877 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 FOXS1O43638 330 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 ATP5JP18859 108 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 MSX2P35548 267 aaPredicted RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 NEK3P51956 506 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 AGFG1P52594 562 aaKnown RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 PURAQ00577 322 aaKnown RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 CREMQ03060 361 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 HLTFQ14527 1009 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS8-211ENST00000452140 SURF1Q15526 300 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 FLYWCH1Q4VC44 716 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 UBXN11Q5T124 520 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 IL31Q6EBC2 164 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 TCTN3Q6NUS6 607 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 ZNF529Q6P280 563 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 SRGAP1Q7Z6B7 1085 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 FRMD5Q7Z6J6 570 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 PPP1R3BQ86XI6 285 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 PLXDC1Q8IUK5 500 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 KIAA0319LQ8IZA0 1049 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 MB21D1Q8N884 522 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 TTC17Q96AE7 1141 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 CPPED1Q9BRF8 314 aaPredicted RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 C1orf43Q9BWL3 253 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 LSM14BQ9BX40 385 aaKnown RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 CPEB1Q9BZB8 566 aaKnown RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 ZMAT3Q9HA38 289 aaKnown RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 PNPOQ9NVS9 261 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 PLA2G3Q9NZ20 509 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 CALCOCO1Q9P1Z2 691 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 FEZ2Q9UHY8 353 aaPredicted RBP5.03□□□□□ -1.6
VPS8-211ENST00000452140 CPA4Q9UI42 421 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 SH3BP1Q9Y3L3 701 aa5.03□□□□□ -1.6
VPS8-211ENST00000452140 PNPLA7Q6ZV29 1317 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 NT5C1B-RDH14C9J2C7 533 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 GPR42O15529 346 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 PLIN1O60240 522 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 PLATP00750 562 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 AHSGP02765 367 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 MYL3P08590 195 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 RPS19P39019 145 aaKnown RBP5.02□□□□□ -1.61
VPS8-211ENST00000452140 IL12RB1P42701 662 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 PHKA1P46020 1223 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 PTH1RQ03431 593 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 FOXL1Q12952 345 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 SAFBQ15424 915 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS8-211ENST00000452140 ELAVL1Q15717 326 aaKnown RBP5.02□□□□□ -1.61
VPS8-211ENST00000452140 RNF220Q5VTB9 566 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 PJA1Q8NG27 643 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 C20orf173Q96LM9 149 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 NELFAQ9H3P2 528 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 ATP6V0A4Q9HBG4 840 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 SPON1Q9HCB6 807 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 DDX21Q9NR30 783 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS8-211ENST00000452140 FBXO34Q9NWN3 711 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 PCDHA6Q9UN73 950 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 L1RE1Q9UN81 338 aa5.02□□□□□ -1.61
VPS8-211ENST00000452140 ZFR2Q9UPR6 939 aaKnown RBP5.02□□□□□ -1.61
VPS8-211ENST00000452140 A0A088AWK7 358 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 B5MCH6 92 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 PMM2O15305 246 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 TEX33O43247 280 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 PQBP1O60828 265 aaKnown RBP5.01□□□□□ -1.61
VPS8-211ENST00000452140 PEX14O75381 377 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 RAD17O75943 681 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 NBPF7P0C2Y1 421 aaPredicted RBP5.01□□□□□ -1.61
VPS8-211ENST00000452140 KITP10721 976 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 GNAT2P19087 354 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 HK1P19367 917 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 PEX2P28328 305 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 PRDX5P30044 214 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 SLC6A4P31645 630 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 CLRN1P58418 232 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 FGL2Q14314 439 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 CSRP2Q16527 193 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 OTUD7BQ6GQQ9 843 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 DARS2Q6PI48 645 aaKnown RBP5.01□□□□□ -1.61
VPS8-211ENST00000452140 APOA5Q6Q788 366 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 MAEAQ7L5Y9 396 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 D2HGDHQ8N465 521 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 PARD3BQ8TEW8 1205 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 TNPO1Q92973 898 aaKnown RBP5.01□□□□□ -1.61
VPS8-211ENST00000452140 PGBD4Q96DM1 585 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 MTFMTQ96DP5 389 aaKnown RBP5.01□□□□□ -1.61
VPS8-211ENST00000452140 PHACTR3Q96KR7 559 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 C22orf23Q9BZE7 217 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 USP25Q9UHP3 1055 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 HDAC5Q9UQL6 1122 aa5.01□□□□□ -1.61
VPS8-211ENST00000452140 TBKBP1A7MCY6 615 aa5□□□□□ -1.61
VPS8-211ENST00000452140 ARIH2O95376 493 aa5□□□□□ -1.61
VPS8-211ENST00000452140 HRGP04196 525 aa5□□□□□ -1.61
VPS8-211ENST00000452140 SNRPA1P09661 255 aaKnown RBP5□□□□□ -1.61
VPS8-211ENST00000452140 SLC6A2P23975 617 aa5□□□□□ -1.61
VPS8-211ENST00000452140 FAM193AP78312 1265 aa5□□□□□ -1.61
VPS8-211ENST00000452140 SEMA5AQ13591 1074 aa5□□□□□ -1.61
VPS8-211ENST00000452140 UBE4AQ14139 1066 aa5□□□□□ -1.61
VPS8-211ENST00000452140 ATP2B3Q16720 1220 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms