RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 RBM19Q9Y4C8 960 aaKnown RBP29.76■■■□□ 2.35
USP42-204ENST00000451154 I3L4J1 428 aa29.75■■■□□ 2.35
USP42-204ENST00000451154 CCL16O15467 120 aa29.75■■■□□ 2.35
USP42-204ENST00000451154 C8AP07357 584 aa29.75■■■□□ 2.35
USP42-204ENST00000451154 SOX4Q06945 474 aaPredicted RBP29.75■■■□□ 2.35
USP42-204ENST00000451154 RILPL1Q5EBL4 403 aa29.75■■■□□ 2.35
USP42-204ENST00000451154 RSPO2Q6UXX9 243 aaPredicted RBP29.75■■■□□ 2.35
USP42-204ENST00000451154 C3orf58Q8NDZ4 430 aa29.75■■■□□ 2.35
USP42-204ENST00000451154 UROC1Q96N76 676 aa29.75■■■□□ 2.35
USP42-204ENST00000451154 PNMA5Q96PV4 448 aa29.75■■■□□ 2.35
USP42-204ENST00000451154 WNT16Q9UBV4 365 aa29.75■■■□□ 2.35
USP42-204ENST00000451154 STK25O00506 426 aa29.74■■■□□ 2.35
USP42-204ENST00000451154 HNRNPA1P09651 372 aaKnown RBP eCLIP29.74■■■□□ 2.35
USP42-204ENST00000451154 AOC1P19801 751 aa29.74■■■□□ 2.35
USP42-204ENST00000451154 TKTP29401 623 aaKnown RBP29.74■■■□□ 2.35
USP42-204ENST00000451154 BRCC3P46736 316 aa29.74■■■□□ 2.35
USP42-204ENST00000451154 ATP2C1P98194 919 aaPredicted RBP29.74■■■□□ 2.35
USP42-204ENST00000451154 RAB33AQ14088 237 aa29.74■■■□□ 2.35
USP42-204ENST00000451154 XKR4Q5GH76 650 aa29.74■■■□□ 2.35
USP42-204ENST00000451154 AXDND1Q5T1B0 1012 aaPredicted RBP29.74■■■□□ 2.35
USP42-204ENST00000451154 ZBTB45Q96K62 511 aaPredicted RBP29.74■■■□□ 2.35
USP42-204ENST00000451154 ZMAT2Q96NC0 199 aaKnown RBP29.74■■■□□ 2.35
USP42-204ENST00000451154 TOPORSQ9NS56 1045 aaPredicted RBP29.74■■■□□ 2.35
USP42-204ENST00000451154 MTRRQ9UBK8 725 aa29.74■■■□□ 2.35
USP42-204ENST00000451154 POLIQ9UNA4 740 aa29.74■■■□□ 2.35
USP42-204ENST00000451154 PTPRZ1P23471 2315 aaPredicted RBP29.74■■■□□ 2.35
USP42-204ENST00000451154 CFAP54Q96N23 3096 aa29.74■■■□□ 2.35
USP42-204ENST00000451154 KRBA1A5PL33 1030 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 ANHXE9PGG2 379 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 CD2BP2O95400 341 aaKnown RBP29.73■■■□□ 2.35
USP42-204ENST00000451154 GJB2P29033 226 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 SLC7A14Q8TBB6 771 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 ACAP3Q96P50 834 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 NTPCRQ9BSD7 190 aaKnown RBP29.73■■■□□ 2.35
USP42-204ENST00000451154 C17orf75Q9HAS0 396 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 CA14Q9ULX7 337 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 CDY1Q9Y6F8 540 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 MYH11P35749 1972 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 DMDP11532 3685 aa29.73■■■□□ 2.35
USP42-204ENST00000451154 VWA3AA6NCI4 1184 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 H3BQV1 296 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 ABLIM1O14639 778 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 TRAPPC3O43617 180 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 GFRA3O60609 400 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 MCF2P10911 925 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 SRFP11831 508 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 HARSP12081 509 aaKnown RBP29.72■■■□□ 2.35
USP42-204ENST00000451154 PROZP22891 400 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 GUCY2CP25092 1073 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 HTR4Q13639 388 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 HYIQ5T013 277 aa29.72■■■□□ 2.35
USP42-204ENST00000451154 RPP25Q9BUL9 199 aaKnown RBP29.72■■■□□ 2.35
USP42-204ENST00000451154 CITO14578 2027 aa29.71■■■□□ 2.35
USP42-204ENST00000451154 MPZL3Q6UWV2 235 aa29.71■■■□□ 2.35
USP42-204ENST00000451154 DDX27Q96GQ7 796 aaKnown RBP29.71■■■□□ 2.35
USP42-204ENST00000451154 TIPINQ9BVW5 301 aa29.71■■■□□ 2.35
USP42-204ENST00000451154 NUMBLQ9Y6R0 609 aa29.71■■■□□ 2.35
USP42-204ENST00000451154 RIF1Q5UIP0 2472 aaKnown RBP29.71■■■□□ 2.35
USP42-204ENST00000451154 XYLBO75191 536 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 HOXA9P31269 272 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 UVSSAQ2YD98 709 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 ANKS3Q6ZW76 656 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 SYT2Q8N9I0 419 aaPredicted RBP29.7■■■□□ 2.35
USP42-204ENST00000451154 ITFG1Q8TB96 612 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 GPR152Q8TDT2 470 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 C18orf25Q96B23 403 aaPredicted RBP29.7■■■□□ 2.35
USP42-204ENST00000451154 SNX27Q96L92 541 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 RTP3Q9BQQ7 232 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 SLC38A7Q9NVC3 462 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 CDH7Q9ULB5 785 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 BACE2Q9Y5Z0 518 aa29.7■■■□□ 2.35
USP42-204ENST00000451154 ZFP37Q9Y6Q3 630 aaPredicted RBP29.7■■■□□ 2.35
USP42-204ENST00000451154 WDR87Q6ZQQ6 2873 aa29.7■■■□□ 2.34
USP42-204ENST00000451154 NOTCH4Q99466 2003 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 NPHP3-ACAD11A0A0J9YXS1 232 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 PODXLO00592 558 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 MEFVO15553 781 aaPredicted RBP29.69■■■□□ 2.34
USP42-204ENST00000451154 PLS3P13797 630 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 KCNE1P15382 129 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 STRN3Q13033 797 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 SEZ6Q53EL9 994 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 PARM1Q6UWI2 310 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 TMEM161BQ8NDZ6 487 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 SPIRE2Q8WWL2 714 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 HCFC1R1Q9NWW0 138 aa29.69■■■□□ 2.34
USP42-204ENST00000451154 PLA2G4BP0C869 781 aa29.68■■■□□ 2.34
USP42-204ENST00000451154 SLC12A3P55017 1021 aa29.68■■■□□ 2.34
USP42-204ENST00000451154 DTWD2Q8NBA8 298 aa29.68■■■□□ 2.34
USP42-204ENST00000451154 FGF13Q92913 245 aa29.68■■■□□ 2.34
USP42-204ENST00000451154 FGF14Q92915 247 aa29.68■■■□□ 2.34
USP42-204ENST00000451154 CDK5RAP3Q96JB5 506 aa29.68■■■□□ 2.34
USP42-204ENST00000451154 PROB1E7EW31 1015 aa29.67■■■□□ 2.34
USP42-204ENST00000451154 MAPTP10636 758 aaKnown RBP29.67■■■□□ 2.34
USP42-204ENST00000451154 RFX1P22670 979 aa29.67■■■□□ 2.34
USP42-204ENST00000451154 SMTNP53814 917 aa29.67■■■□□ 2.34
USP42-204ENST00000451154 CACNB1Q02641 598 aaPredicted RBP29.67■■■□□ 2.34
USP42-204ENST00000451154 CCDC105Q8IYK2 499 aa29.67■■■□□ 2.34
USP42-204ENST00000451154 CNTN3Q9P232 1028 aa29.67■■■□□ 2.34
USP42-204ENST00000451154 ANKFY1Q9P2R3 1169 aa29.67■■■□□ 2.34
USP42-204ENST00000451154 DNMT3BQ9UBC3 853 aaKnown RBP29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms