RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 LGALS13Q9UHV8 139 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 SUGT1Q9Y2Z0 365 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 ACTL7BQ9Y614 415 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 FAM205AQ6ZU69 1335 aa9.16□□□□□ -0.94
LSM5-208ENST00000450169 CASZ1Q86V15 1759 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 WNK3Q9BYP7 1800 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 A0A1W2PRG0 241 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 ANKRD63C9JTQ0 380 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 HAX1O00165 279 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 LAD1O00515 517 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 WDR46O15213 610 aaKnown RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 PRKAB2O43741 272 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 CDH16O75309 829 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 PDE5AO76074 875 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 HAUS5O94927 633 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 CALM1P0DP23 149 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 CALM2P0DP24 149 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 CALM3P0DP25 149 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 HSPA6P17066 643 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 ANXA13P27216 316 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 CALML3P27482 149 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 SCNN1AP37088 669 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 FKBP3Q00688 224 aaKnown RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 MED21Q13503 144 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 HNRNPDQ14103 355 aaKnown RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 KYNUQ16719 465 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 EAPPQ56P03 285 aaPredicted RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 IFIT1BQ5T764 474 aaKnown RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 TTC27Q6P3X3 843 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 KLHL35Q6PF15 583 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 C1orf228Q6PIY5 440 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 CCDC137Q6PK04 289 aaKnown RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 RBM44Q6ZP01 1051 aaKnown RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 PRELID2Q8N945 189 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 DQX1Q8TE96 717 aaKnown RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 ZNF496Q96IT1 587 aaPredicted RBP9.15□□□□□ -0.94
LSM5-208ENST00000450169 UBA5Q9GZZ9 404 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 OSGEPQ9NPF4 335 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 NENFQ9UMX5 172 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 NUMBLQ9Y6R0 609 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 BCORQ6W2J9 1755 aa9.15□□□□□ -0.94
LSM5-208ENST00000450169 CCDC194A0A1B0GVG4 234 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 PVALEFA0A1B0GWK0 134 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 CFAP69A5D8W1 941 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 RASA4BC9J798 803 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 F8W8V4 182 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 TRAF5O00463 557 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 P4HA2O15460 535 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 RASA4O43374 803 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 TCEA3O75764 348 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 TTC4O95801 387 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 GAS8O95995 478 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 GEMIN4P57678 1058 aaKnown RBP9.15□□□□□ -0.95
LSM5-208ENST00000450169 TROAPQ12815 778 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 SPARCL1Q14515 664 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 PDK4Q16654 411 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 PFKFB3Q16875 520 aaPredicted RBP9.15□□□□□ -0.95
LSM5-208ENST00000450169 FYB2Q5VWT5 728 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 KLHDC10Q6PID8 442 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 FOXR2Q6PJQ5 311 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 PTF1AQ7RTS3 328 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 TREML1Q86YW5 311 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 ZBED8Q8IZ13 594 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 NUP93Q8N1F7 819 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 ARHGAP24Q8N264 748 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 HSPBAP1Q96EW2 488 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 ZNF512BQ96KM6 892 aaPredicted RBP9.15□□□□□ -0.95
LSM5-208ENST00000450169 PRICKLE1Q96MT3 831 aaPredicted RBP9.15□□□□□ -0.95
LSM5-208ENST00000450169 SYNGAP1Q96PV0 1343 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.95
LSM5-208ENST00000450169 KANSL2Q9H9L4 492 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 NPHS2Q9NP85 383 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 TRPV5Q9NQA5 729 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 ARL8BQ9NVJ2 186 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 KIAA1522Q9P206 1035 aaPredicted RBP9.15□□□□□ -0.95
LSM5-208ENST00000450169 NAALADL1Q9UQQ1 740 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 PTPN22Q9Y2R2 807 aa9.15□□□□□ -0.95
LSM5-208ENST00000450169 COL18A1P39060 1754 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 TJP1Q07157 1748 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 CCDC160A6NGH7 325 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 STRNO43815 780 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 PGM3O95394 542 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 SNRPA1P09661 255 aaKnown RBP9.14□□□□□ -0.95
LSM5-208ENST00000450169 CETPP11597 493 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ALAS1P13196 640 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 PRKCIP41743 596 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 AP2B1P63010 937 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 PDE1BQ01064 536 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 LRRC41Q15345 812 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ADRM1Q16186 407 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ARSIQ5FYB1 569 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 TMEM63BQ5T3F8 832 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 RFX8Q6ZV50 586 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 SV2BQ7L1I2 683 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 TRIM59Q8IWR1 403 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 MAGEB6Q8N7X4 407 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 OR6Y1Q8NGX8 325 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ERMNQ8TAM6 284 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 DEPTORQ8TB45 409 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 SLC35G2Q8TBE7 412 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms