RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MYRIPQ8NFW9 859 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 PXYLP1Q8TE99 480 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 TATDN2Q93075 761 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 FAM212AQ96EL1 285 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 ADPGKQ9BRR6 497 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 CDHR5Q9HBB8 845 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 NENFQ9UMX5 172 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 GINS2Q9Y248 185 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 DUSP10Q9Y6W6 482 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 PHACTR2O75167 634 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 EIF4BP23588 611 aaKnown RBP15.36■□□□□ 0.05
USP39-207ENST00000450066 CST5P28325 142 aaPredicted RBP15.36■□□□□ 0.05
USP39-207ENST00000450066 NBPF20Q3BBV1 942 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 SLC35F6Q8N357 371 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 KLHDC9Q8NEP7 349 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 SLC30A5Q8TAD4 765 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 RAET1EQ8TD07 263 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 OSMRQ99650 979 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 L2HGDHQ9H9P8 463 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 SCN10AQ9Y5Y9 1956 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 DDX3XO00571 662 aaKnown RBP eCLIP15.36■□□□□ 0.059e-13■■■■□ 21.9
USP39-207ENST00000450066 ATP8B3O60423 1300 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 CXCL8P10145 99 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 HOXA11P31270 313 aaPredicted RBP15.36■□□□□ 0.05
USP39-207ENST00000450066 NCOA4Q13772 614 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 ALKBH5Q6P6C2 394 aaKnown RBP15.36■□□□□ 0.05
USP39-207ENST00000450066 CATSPER4Q7RTX7 472 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 TRAPPC11Q7Z392 1133 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 APBB1IPQ7Z5R6 666 aaPredicted RBP15.36■□□□□ 0.05
USP39-207ENST00000450066 TMEM192Q8IY95 271 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 OLIG1Q8TAK6 271 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 SECISBP2LQ93073 1101 aaKnown RBP15.36■□□□□ 0.05
USP39-207ENST00000450066 ERO1AQ96HE7 468 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 MTMR12Q9C0I1 747 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 GTF2IRD1Q9UHL9 959 aa15.36■□□□□ 0.05
USP39-207ENST00000450066 FGFR4P22455 802 aa15.35■□□□□ 0.05
USP39-207ENST00000450066 CRYBB1P53674 252 aaPredicted RBP15.35■□□□□ 0.05
USP39-207ENST00000450066 ARHGEF6Q15052 776 aa15.35■□□□□ 0.05
USP39-207ENST00000450066 DCAF4L1Q3SXM0 396 aa15.35■□□□□ 0.05
USP39-207ENST00000450066 CCSAPQ6IQ19 270 aaPredicted RBP15.35■□□□□ 0.05
USP39-207ENST00000450066 MACROD2A1Z1Q3 448 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 CTAGE9A4FU28 777 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 ASGR1P07306 291 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 USP8P40818 1118 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 TFAMQ00059 246 aaKnown RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 SNX17Q15036 470 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 KCNA10Q16322 511 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 GLYCTKQ8IVS8 523 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 EFCAB13Q8IY85 973 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 RNF10Q8N5U6 811 aaKnown RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 AGPAT1Q99943 283 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 IMPG2Q9BZV3 1241 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 ASB7Q9H672 318 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 SAGE1Q9NXZ1 904 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 CYP26A1O43174 497 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 FKTNO75072 461 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 URI1O94763 535 aaPredicted RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 TNNC2P02585 160 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 TMEM191BP0C7N4 346 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 TBXAS1P24557 533 aaPredicted RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 AXLP30530 894 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 NOTUMQ6P988 496 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 SESTD1Q86VW0 696 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 PCSK9Q8NBP7 692 aaKnown RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 LNX1Q8TBB1 728 aaPredicted RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 ELMO3Q96BJ8 720 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 ANKRD36BP1Q96IX9 119 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 NAPGQ99747 312 aaPredicted RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 APOBEC3GQ9HC16 384 aaKnown RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 DDX20Q9UHI6 824 aaKnown RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 THSD7BQ9C0I4 1608 aa15.34■□□□□ 0.05
USP39-207ENST00000450066 TRIP12Q14669 1992 aaPredicted RBP15.34■□□□□ 0.05
USP39-207ENST00000450066 BTNL10A8MVZ5 291 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 LACTBL1A8MY62 500 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 MEFVO15553 781 aaPredicted RBP15.33■□□□□ 0.04
USP39-207ENST00000450066 ASS1P00966 412 aaKnown RBP15.33■□□□□ 0.04
USP39-207ENST00000450066 CST3P01034 146 aaPredicted RBP15.33■□□□□ 0.04
USP39-207ENST00000450066 TNFAIP3P21580 790 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 GTF2F1P35269 517 aaKnown RBP eCLIP15.33■□□□□ 0.04
USP39-207ENST00000450066 GRM5P41594 1212 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 NOP14P78316 857 aaKnown RBP15.33■□□□□ 0.04
USP39-207ENST00000450066 HTRA3P83110 453 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 CUL2Q13617 745 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 SGSM1Q2NKQ1 1148 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 SPOPLQ6IQ16 392 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 EPS8L1Q8TE68 723 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 TMEM40Q8WWA1 233 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 ACAP3Q96P50 834 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 NOCTQ9UK39 431 aaKnown RBP15.33■□□□□ 0.04
USP39-207ENST00000450066 INTUQ9ULD6 942 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 MROH7Q68CQ1 1323 aa15.33■□□□□ 0.04
USP39-207ENST00000450066 SGPL1O95470 568 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 RPLP2P05387 115 aaKnown RBP15.32■□□□□ 0.04
USP39-207ENST00000450066 PRMT2P55345 433 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 SLC10A6Q3KNW5 377 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 GDF6Q6KF10 455 aaPredicted RBP15.32■□□□□ 0.04
USP39-207ENST00000450066 SLC47A2Q86VL8 602 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 TRIM58Q8NG06 486 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 U2AF1L4Q8WU68 220 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms