RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 SPATA33Q96N06 139 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 C2orf40Q9H1Z8 148 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 PPARGC1AQ9UBK2 798 aaKnown RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 TCP11X1B4DZS4 312 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 DCTN3O75935 186 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 ITGA4P13612 1032 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 IL1R1P14778 569 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 SHMT1P34896 483 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 HSD17B3P37058 310 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 SLC1A1P43005 524 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 BCAR1P56945 870 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 NCOA4Q13772 614 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 KYNUQ16719 465 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 MOXD1Q6UVY6 613 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 ARMCX2Q7L311 632 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 ANKMY2Q8IV38 441 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 MICALL2Q8IY33 904 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 RBBP8NLQ8NC74 664 aaPredicted RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 ATG4CQ96DT6 458 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 PRMT1Q99873 361 aaKnown RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 CBWD1Q9BRT8 395 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 CARD9Q9H257 536 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 CNOT7Q9UIV1 285 aaKnown RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 TOPAZ1Q8N9V7 1692 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 POLRMTO00411 1230 aaKnown RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 AGTP01019 485 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 KRT3P12035 628 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 NCF2P19878 526 aaPredicted RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 PRKCEQ02156 737 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 TNFAIP2Q03169 654 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 SLC29A2Q14542 456 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 MMEL1Q495T6 779 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 FAM193BQ96PV7 902 aaPredicted RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 LRRC37BQ96QE4 947 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 RBM15Q96T37 977 aaKnown RBP eCLIP7.58□□□□□ -1.2
BEST1-202ENST00000449131 TARS2Q9BW92 718 aaKnown RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 ETNK1Q9HBU6 452 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 TMEM8AQ9HCN3 771 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 OSGEPQ9NPF4 335 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 DDX4Q9NQI0 724 aaKnown RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 FIS1Q9Y3D6 152 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 PCDHB2Q9Y5E7 798 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 PIK3R2O00459 728 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 KRT38O76015 456 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 PRKCBP05771 671 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 HSPA9P38646 679 aaKnown RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 KLHL38Q2WGJ6 581 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 ATG16L1Q676U5 607 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 C1orf228Q6PIY5 440 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 CBWD2Q8IUF1 395 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 HIPK4Q8NE63 616 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 XPO6Q96QU8 1125 aaKnown RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 MOV10L1Q9BXT6 1211 aaKnown RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 OSBPL8Q9BZF1 889 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 CCDC68Q9H2F9 335 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 GOLGA8RI6L899 631 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 MAP2K7O14733 419 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 LUC7L3O95232 432 aaKnown RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 STAT4Q14765 748 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 P3H1Q32P28 736 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 SH2D4BQ5SQS7 431 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 CRLF3Q8IUI8 442 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 APOBEC3FQ8IUX4 373 aaKnown RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 ATP11CQ8NB49 1132 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 ZNF280CQ8ND82 737 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 CERKQ8TCT0 537 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 C18orf8Q96DM3 657 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 BTBD6Q96KE9 485 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 MED15Q96RN5 788 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 TUBB6Q9BUF5 446 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 DDX23Q9BUQ8 820 aaKnown RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 YIPF3Q9GZM5 350 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 DDX56Q9NY93 547 aaKnown RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 P4HA2O15460 535 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 SGPL1O95470 568 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 SRGAP2BP0DMP2 458 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 ITIH2P19823 946 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 EFNA5P52803 228 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 TTLL4Q14679 1199 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 EMC2Q15006 297 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 IL17AQ16552 155 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 AGBL2Q5U5Z8 902 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 SPOPLQ6IQ16 392 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 WDR59Q6PJI9 974 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 DSTYKQ6XUX3 929 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 CXorf56Q9H5V9 222 aa7.57□□□□□ -1.2
BEST1-202ENST00000449131 TOPORSQ9NS56 1045 aaPredicted RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 NOP53Q9NZM5 478 aaKnown RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 KLHL8Q9P2G9 620 aaPredicted RBP7.57□□□□□ -1.2
BEST1-202ENST00000449131 GYG2O15488 501 aa7.56□□□□□ -1.2
BEST1-202ENST00000449131 CDH16O75309 829 aa7.56□□□□□ -1.2
BEST1-202ENST00000449131 SKAP2O75563 359 aaPredicted RBP7.56□□□□□ -1.2
BEST1-202ENST00000449131 SYF2O95926 243 aaKnown RBP7.56□□□□□ -1.2
BEST1-202ENST00000449131 KITP10721 976 aa7.56□□□□□ -1.2
BEST1-202ENST00000449131 CDC25CP30307 473 aa7.56□□□□□ -1.2
BEST1-202ENST00000449131 DBN1Q16643 649 aa7.56□□□□□ -1.2
BEST1-202ENST00000449131 HIF1AQ16665 826 aa7.56□□□□□ -1.2
BEST1-202ENST00000449131 TRMT10CQ7L0Y3 403 aaKnown RBP7.56□□□□□ -1.2
BEST1-202ENST00000449131 BZW1Q7L1Q6 419 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms