RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MYH11P35749 1972 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 K7ENM7 598 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 FGFR3P22607 806 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 STAT6P42226 847 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 ZBTB41Q5SVQ8 909 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 CNNM4Q6P4Q7 775 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 HASPINQ8TF76 798 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 RIN2Q8WYP3 895 aaPredicted RBP15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 C18orf25Q96B23 403 aaPredicted RBP15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 DDX27Q96GQ7 796 aaKnown RBP15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 UROC1Q96N76 676 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 CLSTN3Q9BQT9 956 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 TTPALQ9BTX7 342 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 APOL5Q9BWW9 433 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 ZHX3Q9H4I2 956 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 DZANK1Q9NVP4 752 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 ANKFY1Q9P2R3 1169 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 SEL1LQ9UBV2 794 aa15.37■□□□□ 0.05
RTFDC1-204ENST00000449062 SF3B1O75533 1304 aaKnown RBP eCLIP15.37■□□□□ 0.056e-6■■■■■ 90.4
RTFDC1-204ENST00000449062 TISP43B9A030 160 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 OGTO15294 1046 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 B3GAT3O94766 335 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 HARSP12081 509 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 GAP43P17677 238 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 ADSSP30520 456 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 SSTR3P32745 418 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 RPL9P32969 192 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 ABCD1P33897 745 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 CA8P35219 290 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 TNFSF9P41273 254 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 LIG4P49917 911 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 KCNA1Q09470 495 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 ENOX2Q16206 610 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 FAM171A1Q5VUB5 890 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 KIAA1841Q6NSI8 718 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 KCNG4Q8TDN1 519 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 HDAC7Q8WUI4 952 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 CHAMP1Q96JM3 812 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 FGFBP2Q9BYJ0 223 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 C11orf16Q9NQ32 467 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 OLFML3Q9NRN5 406 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 SLC38A7Q9NVC3 462 aa15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 CPSF3Q9UKF6 684 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-204ENST00000449062 LACTBL1A8MY62 500 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 HNRNPDLO14979 420 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 ADAM12O43184 909 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 ADH1AP07327 375 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 WEE2P0C1S8 567 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 CXCL8P10145 99 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 RPL17P18621 184 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 CASP5P51878 434 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 ELAVL2Q12926 359 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 RARS2Q5T160 578 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 RESP18Q5W5W9 173 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 PRSS55Q6UWB4 352 aaPredicted RBP15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 GPR149Q86SP6 731 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 RNF135Q8IUD6 432 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 TMEM130Q8N3G9 435 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 TMEM87AQ8NBN3 555 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 CMASQ8NFW8 434 aaPredicted RBP15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 STAMQ92783 540 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 HVCN1Q96D96 273 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 POP1Q99575 1024 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 RHOBTB2Q9BYZ6 727 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 CUEDC2Q9H467 287 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 CFAP45Q9UL16 551 aa15.35■□□□□ 0.05
RTFDC1-204ENST00000449062 TGM5O43548 720 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 TBC1D4O60343 1298 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 BRCC3P46736 316 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 MRPL58Q14197 206 aaKnown RBP15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 KYAT1Q16773 422 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 HERC4Q5GLZ8 1057 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 ATAT1Q5SQI0 421 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 CRELD2Q6UXH1 353 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 RSPO2Q6UXX9 243 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 TMC5Q6UXY8 1006 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 PALB2Q86YC2 1186 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 IQUBQ8NA54 791 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 BICD1Q96G01 975 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 TSPAN18Q96SJ8 248 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 TRIM9Q9C026 710 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 TNMDQ9H2S6 317 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 POMKQ9H5K3 350 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 MRPL44Q9H9J2 332 aaKnown RBP15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 PANK4Q9NVE7 773 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 TBC1D7Q9P0N9 293 aa15.34■□□□□ 0.05
RTFDC1-204ENST00000449062 ZDBF2Q9HCK1 2354 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 I3L4J1 428 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 PODXLO00592 558 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 GLUD1P00367 558 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 SPATA31D3P0C874 917 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 CYP3A5P20815 502 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 LRPAP1P30533 357 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 HOXD13P35453 343 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 MTHFRP42898 656 aa15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 POU5F1Q01860 360 aaKnown RBP15.33■□□□□ 0.04
RTFDC1-204ENST00000449062 SPAG1Q07617 926 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms