RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 GAS2L3Q86XJ1 694 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 CREBRFQ8IUR6 639 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 RNF214Q8ND24 703 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 OR5B17Q8NGF7 314 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 KIF12Q96FN5 646 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 BPIFA3Q9BQP9 254 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 PLEKHA5Q9HAU0 1116 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 GOLGA2P5Q9HBQ8 144 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 HOXA2O43364 376 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 KCNE1P15382 129 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 PBX3P40426 434 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 VAMP7P51809 220 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 BTG3Q14201 252 aaPredicted RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 CCDC40Q4G0X9 1142 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 SPRED2Q7Z698 418 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 PARD3BQ8TEW8 1205 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 CNOT6LQ96LI5 555 aaKnown RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 PPP1R10Q96QC0 940 aaKnown RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 RAD9AQ99638 391 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 MKNK1Q9BUB5 465 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 DNAJB4Q9UDY4 337 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 YBX2Q9Y2T7 364 aaKnown RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 MRPL42Q9Y6G3 142 aaKnown RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 CASTOR2A6NHX0 329 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 F8W810 466 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 MAPK13O15264 365 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 IL18RAPO95256 599 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 THP07101 528 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 ATP1A3P13637 1013 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 BFSP1Q12934 665 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 TMEM132DQ14C87 1099 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 ZBTB6Q15916 424 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 CDKAL1Q5VV42 579 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 INTS8Q75QN2 995 aaKnown RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 CGRRF1Q99675 332 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 PBX4Q9BYU1 374 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 MTMR12Q9C0I1 747 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 ASB7Q9H672 318 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 CWH43Q9H720 699 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 NRDE2Q9H7Z3 1164 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 MMRN2Q9H8L6 949 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 ARMCX3Q9UH62 379 aaPredicted RBP12.85□□□□□ -0.35
RCL1-208ENST00000448872 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
RCL1-208ENST00000448872 COL4A6Q14031 1691 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 PPEF2O14830 753 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 IKBKBO14920 756 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 CA3P07451 260 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 KRT13P13646 458 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 TNNI1P19237 187 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 RNASELQ05823 741 aaKnown RBP12.84□□□□□ -0.35
RCL1-208ENST00000448872 PPP3CAQ08209 521 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 GRIK3Q13003 919 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 FRMD5Q7Z6J6 570 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 WDR49Q8IV35 697 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 TRIM59Q8IWR1 403 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 CD302Q8IX05 232 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 CMTR2Q8IYT2 770 aaKnown RBP12.84□□□□□ -0.35
RCL1-208ENST00000448872 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 FAM200AQ8TCP9 573 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 TMC2Q8TDI7 906 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 FNBP1Q96RU3 617 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 INTS13Q9NVM9 706 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
RCL1-208ENST00000448872 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.83□□□□□ -0.36
RCL1-208ENST00000448872 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.83□□□□□ -0.36
RCL1-208ENST00000448872 BECN2A8MW95 431 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 KCNJ18B7U540 433 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 ZC3H11AO75152 810 aaKnown RBP eCLIP12.83□□□□□ -0.36
RCL1-208ENST00000448872 FGFR1OPO95684 399 aaKnown RBP12.83□□□□□ -0.36
RCL1-208ENST00000448872 GNA14O95837 355 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 ZNF18P17022 549 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 GCLMP48507 274 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 CLCNKBP51801 687 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 MARSP56192 900 aaKnown RBP12.83□□□□□ -0.36
RCL1-208ENST00000448872 CLDN10P78369 228 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 DSC1Q08554 894 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 KCNJ12Q14500 433 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 TCP11X2Q5H9J9 407 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 PRPF38BQ5VTL8 546 aaKnown RBP12.83□□□□□ -0.36
RCL1-208ENST00000448872 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 COLGALT2Q8IYK4 626 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
RCL1-208ENST00000448872 SLC35C1Q96A29 364 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 MRPL9Q9BYD2 267 aaKnown RBP12.83□□□□□ -0.36
RCL1-208ENST00000448872 RBSNQ9H1K0 784 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 KANSL3Q9P2N6 904 aa12.83□□□□□ -0.36
RCL1-208ENST00000448872 DERAQ9Y315 318 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms