RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 C1orf112Q9NSG2 853 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 COQ4Q9Y3A0 265 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 ZNFX1Q9P2E3 1918 aaKnown RBP15.86■□□□□ 0.13
SF1-211ENST00000448404 MYO1FO00160 1098 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 RARAP10276 462 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 ANXA13P27216 316 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 SSR1P43307 286 aaKnown RBP15.86■□□□□ 0.13
SF1-211ENST00000448404 ATP13A4Q4VNC1 1196 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 PSPC1Q8WXF1 523 aaKnown RBP15.86■□□□□ 0.13
SF1-211ENST00000448404 MAFBQ9Y5Q3 323 aaPredicted RBP15.86■□□□□ 0.13
SF1-211ENST00000448404 LCTP09848 1927 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 P4HA2O15460 535 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 RPL21P46778 160 aaKnown RBP15.85■□□□□ 0.13
SF1-211ENST00000448404 STAT5BP51692 787 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 PTENP60484 403 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 CCDC25Q86WR0 208 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 RHOT2Q8IXI1 618 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 TMEM192Q8IY95 271 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 PORCNQ9H237 461 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 CARD9Q9H257 536 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 DHX33Q9H6R0 707 aaKnown RBP15.85■□□□□ 0.13
SF1-211ENST00000448404 RNF19AQ9NV58 838 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 UTP11Q9Y3A2 253 aaKnown RBP15.85■□□□□ 0.13
SF1-211ENST00000448404 PCDHB4Q9Y5E5 795 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 BRCA1P38398 1863 aaKnown RBP15.85■□□□□ 0.13
SF1-211ENST00000448404 H0YGN5 161 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 EXTL3O43909 919 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 OPA1O60313 960 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 C4BPAP04003 597 aaKnown RBP15.85■□□□□ 0.13
SF1-211ENST00000448404 FGFR4P22455 802 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 HSPA9P38646 679 aaKnown RBP15.85■□□□□ 0.13
SF1-211ENST00000448404 SLCO1A2P46721 670 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 ALS2CLQ60I27 953 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 ICE2Q659A1 982 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 TMC3Q7Z5M5 1100 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 THNSL1Q8IYQ7 743 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 CALR3Q96L12 384 aaKnown RBP15.85■□□□□ 0.13
SF1-211ENST00000448404 NLRP4Q96MN2 994 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 CEP89Q96ST8 783 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 MTMR12Q9C0I1 747 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 ASCC2Q9H1I8 757 aaPredicted RBP15.85■□□□□ 0.13
SF1-211ENST00000448404 NFS1Q9Y697 457 aa15.85■□□□□ 0.13
SF1-211ENST00000448404 LOC102724159A0A0B4J2E5 919 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 TLDC2A0PJX2 215 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 WEE2P0C1S8 567 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 SCP2P22307 547 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 PWP2Q15269 919 aaKnown RBP15.84■□□□□ 0.13
SF1-211ENST00000448404 ZACNQ401N2 412 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 BCAS4Q8TDM0 211 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 CHST7Q9NS84 486 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 DAAM1Q9Y4D1 1078 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 MYPNQ86TC9 1320 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 CES2O00748 559 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 MAFGO15525 162 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 CYP2C8P10632 490 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 OAZ1P54368 228 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 PPFIA1Q13136 1202 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 CCDC137Q6PK04 289 aaKnown RBP15.84■□□□□ 0.13
SF1-211ENST00000448404 MMS22LQ6ZRQ5 1243 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 RNF149Q8NC42 400 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 CCDC26Q8TAB7 109 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 WHAMMQ8TF30 809 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 CD101Q93033 1021 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 RNF181Q9P0P0 153 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 R3HDM2Q9Y2K5 976 aaKnown RBP15.84■□□□□ 0.13
SF1-211ENST00000448404 CSADQ9Y600 493 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 MROH7Q68CQ1 1323 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 MCM3APO60318 1980 aa15.84■□□□□ 0.13
SF1-211ENST00000448404 GOLGA8KD6RF30 607 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 PI4K2BG5E9Z4 385 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 CCDC188H7C350 402 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 MAPK4P31152 587 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 CLCN3P51790 818 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 CLEC16AQ2KHT3 1053 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 ACAD10Q6JQN1 1059 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 ZDHHC24Q6UX98 284 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 RHPN2Q8IUC4 686 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 CCDC105Q8IYK2 499 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 GPC2Q8N158 579 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 MDM1Q8TC05 714 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 TMC2Q8TDI7 906 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 TIPINQ9BVW5 301 aa15.83■□□□□ 0.13
SF1-211ENST00000448404 ITGBL1O95965 494 aaPredicted RBP15.83■□□□□ 0.12
SF1-211ENST00000448404 RFX1P22670 979 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 PTGIRP43119 386 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 C15orf39Q6ZRI6 1047 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 PACS2Q86VP3 889 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 SULF1Q8IWU6 871 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 RDM1Q8NG50 284 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 ERP44Q9BS26 406 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 SEMA4AQ9H3S1 761 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 TJP2Q9UDY2 1190 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 NOVA2Q9UNW9 492 aaKnown RBP15.83■□□□□ 0.12
SF1-211ENST00000448404 NFASCO94856 1347 aa15.83■□□□□ 0.12
SF1-211ENST00000448404 FDX1P10109 184 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 NR1D1P20393 614 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 ARL2P36404 184 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 TAS2R40P59535 323 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 MYL6P60660 151 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 RPL7AP62424 266 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms