RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ASTN2O75129 1339 aaPredicted RBP13.78□□□□□ -0.2
SHC1-210ENST00000448116 LTBP1Q14766 1721 aa13.77□□□□□ -0.2
SHC1-210ENST00000448116 LACTB2Q53H82 288 aaPredicted RBP13.77□□□□□ -0.2
SHC1-210ENST00000448116 TRPM8Q7Z2W7 1104 aa13.77□□□□□ -0.2
SHC1-210ENST00000448116 TMEM8AQ9HCN3 771 aa13.77□□□□□ -0.2
SHC1-210ENST00000448116 ASAP2O43150 1006 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 ICAM1P05362 532 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 ATF2P15336 505 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 CEP170P1Q96L14 293 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 C9orf72Q96LT7 481 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 HERPUD2Q9BSE4 406 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 SCN9AQ15858 1988 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 ONECUT3O60422 494 aaPredicted RBP13.77□□□□□ -0.21
SHC1-210ENST00000448116 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
SHC1-210ENST00000448116 CYP1B1Q16678 543 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 HP1BP3Q5SSJ5 553 aaPredicted RBP13.77□□□□□ -0.21
SHC1-210ENST00000448116 CYP4F22Q6NT55 531 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 GSTA5Q7RTV2 222 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 PIGWQ7Z7B1 504 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 C12orf56Q8IXR9 622 aa13.77□□□□□ -0.21
SHC1-210ENST00000448116 MRRFQ96E11 262 aaKnown RBP13.77□□□□□ -0.21
SHC1-210ENST00000448116 R3HDM2Q9Y2K5 976 aaKnown RBP13.77□□□□□ -0.21
SHC1-210ENST00000448116 O00370 1275 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 GAS8O95995 478 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 MAPTP10636 758 aaKnown RBP13.76□□□□□ -0.21
SHC1-210ENST00000448116 BRAFP15056 766 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 TNNI1P19237 187 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 PSMC5P62195 406 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 ZNF365Q70YC5 407 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 TRMT10CQ7L0Y3 403 aaKnown RBP13.76□□□□□ -0.21
SHC1-210ENST00000448116 TMEM161BQ8NDZ6 487 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 SYTL5Q8TDW5 730 aaPredicted RBP13.76□□□□□ -0.21
SHC1-210ENST00000448116 PSPC1Q8WXF1 523 aaKnown RBP13.76□□□□□ -0.21
SHC1-210ENST00000448116 RMDN3Q96TC7 470 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 LRRC19Q9H756 370 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 KLHL11Q9NVR0 708 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 SPATA31A6Q5VVP1 1343 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 FSCN2O14926 492 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 MTA2O94776 668 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 RALAP11233 206 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 HSD17B4P51659 736 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 CAPN12Q6ZSI9 719 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 SRRM1Q8IYB3 904 aaKnown RBP13.76□□□□□ -0.21
SHC1-210ENST00000448116 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 P3H4Q92791 437 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 THOC1Q96FV9 657 aaKnown RBP13.76□□□□□ -0.21
SHC1-210ENST00000448116 SNF8Q96H20 258 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 C11orf70Q9BRQ4 267 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 C1orf112Q9NSG2 853 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.76□□□□□ -0.212e-7■□□□□ 9.9
SHC1-210ENST00000448116 KIF13BQ9NQT8 1826 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 UBOX5O94941 541 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 CCNE2O96020 404 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 GH1P01241 217 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 XRCC4Q13426 336 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 CLEC16AQ2KHT3 1053 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 KAZNQ674X7 775 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 SPOPLQ6IQ16 392 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 TBC1D22BQ9NU19 505 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.76□□□□□ -0.21
SHC1-210ENST00000448116 UBIAD1Q9Y5Z9 338 aa13.76□□□□□ -0.21
SHC1-210ENST00000448116 LRRC37AA6NMS7 1700 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 ZNF536O15090 1300 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 GJB6O95452 261 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 RPSAP08865 295 aaKnown RBP13.75□□□□□ -0.21
SHC1-210ENST00000448116 GHRP10912 638 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 NSFP46459 744 aaKnown RBP13.75□□□□□ -0.21
SHC1-210ENST00000448116 ELF3P78545 371 aaPredicted RBP13.75□□□□□ -0.21
SHC1-210ENST00000448116 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 CNKSR1Q969H4 720 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 EZRP15311 586 aaKnown RBP13.75□□□□□ -0.21
SHC1-210ENST00000448116 CD58P19256 250 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 ITIH2P19823 946 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 STX2P32856 288 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 NF2P35240 595 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 ARHGEF16Q5VV41 709 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 ADAM33Q9BZ11 813 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 ROPN1BQ9BZX4 212 aaPredicted RBP13.75□□□□□ -0.21
SHC1-210ENST00000448116 ROPN1Q9HAT0 212 aaPredicted RBP13.75□□□□□ -0.21
SHC1-210ENST00000448116 GABBR1Q9UBS5 961 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 SYNPO2Q9UMS6 1093 aa13.75□□□□□ -0.21
SHC1-210ENST00000448116 WDR64B1ANS9 1081 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 SNX3O60493 162 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 GPC3P51654 580 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 NCKAP1LP55160 1127 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 ITIH4Q14624 930 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 TCEAL1Q15170 157 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 ANO5Q75V66 913 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 MCOLN2Q8IZK6 566 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 KIF2BQ8N4N8 673 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 DDX1Q92499 740 aaKnown RBP13.74□□□□□ -0.21
SHC1-210ENST00000448116 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 TMEM109Q9BVC6 243 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 WHRNQ9P202 907 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 QSER1Q2KHR3 1735 aa13.74□□□□□ -0.21
SHC1-210ENST00000448116 THSD7AQ9UPZ6 1657 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms