RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 GUCY2FP51841 1108 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 MARSP56192 900 aaKnown RBP19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 POU5F1Q01860 360 aaKnown RBP19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 TCP11X2Q5H9J9 407 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 NOMO2Q5JPE7 1267 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 RASIP1Q5U651 963 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 TRIM59Q8IWR1 403 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 ABI1Q8IZP0 508 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 CASD1Q96PB1 797 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 FNBP1Q96RU3 617 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 CGRRF1Q99675 332 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 ASB7Q9H672 318 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 MMRN2Q9H8L6 949 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 METTL14Q9HCE5 456 aaKnown RBP19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 TAB2Q9NYJ8 693 aa19.5■□□□□ 0.71
TRAPPC4-203ENST00000447216 DGKIO75912 1065 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 KCNE1P15382 129 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 TNNI1P19237 187 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 CDK11BP21127 795 aaKnown RBP19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 TFAMQ00059 246 aaKnown RBP19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 TMEM132DQ14C87 1099 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 KRT31Q15323 416 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 SURF1Q15526 300 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 CD302Q8IX05 232 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 OR5B17Q8NGF7 314 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 ZNF516Q92618 1163 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 C18orf25Q96B23 403 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 TMEM117Q9H0C3 514 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 HCSTQ9UBK5 93 aa19.49■□□□□ 0.71
TRAPPC4-203ENST00000447216 INPPL1O15357 1258 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 HOXA2O43364 376 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 ATP2A2P16615 1042 aaKnown RBP19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 EEF1GP26641 437 aaKnown RBP19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 TPM4P67936 248 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 PPP3CAQ08209 521 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 HERC6Q8IVU3 1022 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 URGCPQ8TCY9 931 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 SLC35C1Q96A29 364 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 PPP1R10Q96QC0 940 aaKnown RBP19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 SLC9A7Q96T83 725 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 TUBGCP2Q9BSJ2 902 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 INTS13Q9NVM9 706 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 CACNG4Q9UBN1 327 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 TUBGCP4Q9UGJ1 667 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 NLRC5Q86WI3 1866 aa19.48■□□□□ 0.71
TRAPPC4-203ENST00000447216 B4GALT3O60512 393 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 THP07101 528 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 PRKCSHP14314 528 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 GCLMP48507 274 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 SOX4Q06945 474 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 SCARA3Q6AZY7 606 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 FAM109BQ6ICB4 259 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 WDR49Q8IV35 697 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 ZBED2Q9BTP6 218 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 MTMR12Q9C0I1 747 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 VPS16Q9H269 839 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 GOLGA2P5Q9HBQ8 144 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 TBC1D13Q9NVG8 400 aa19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 LIMA1Q9UHB6 759 aaKnown RBP19.47■□□□□ 0.71
TRAPPC4-203ENST00000447216 GRXCR1A8MXD5 290 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 GJB5O95377 273 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 TMEM191BP0C7N4 346 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 RABGGTBP53611 331 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 COPB1P53618 953 aaKnown RBP19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 MCCD1P59942 119 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 RNASELQ05823 741 aaKnown RBP19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 KCNH2Q12809 1159 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 GRIK3Q13003 919 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 NAB2Q15742 525 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 ZBTB6Q15916 424 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 MAN2A1Q16706 1144 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 ZNF280BQ86YH2 543 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 ZNF689Q96CS4 500 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 ANKRD36BP1Q96IX9 119 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 YME1L1Q96TA2 773 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 RC3H2Q9HBD1 1191 aaKnown RBP19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 DERAQ9Y315 318 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 C2CD2Q9Y426 696 aa19.46■□□□□ 0.71
TRAPPC4-203ENST00000447216 CASTOR2A6NHX0 329 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 PES1O00541 588 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 DDHD2O94830 711 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 TNNC2P02585 160 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 CLDN10P78369 228 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 ENPEPQ07075 957 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 DUOXA2Q1HG44 320 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 CBWD6Q4V339 395 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 CBWD3Q5JTY5 395 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 MIIPQ5JXC2 388 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 CBWD5Q5RIA9 395 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 CHRDL2Q6WN34 429 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 APTXQ7Z2E3 356 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 USP37Q86T82 979 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 ANKRD20A12PQ8NF67 263 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 BEST2Q8NFU1 509 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 PHOSPHO2Q8TCD6 241 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 CACTINQ8WUQ7 758 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 RABGGTAQ92696 567 aa19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 DPP3Q9NY33 737 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms