RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 C18orf25Q96B23 403 aaPredicted RBP20.57■□□□□ 0.88
COMMD1-204ENST00000445644 ACAP3Q96P50 834 aa20.57■□□□□ 0.88
COMMD1-204ENST00000445644 TTPALQ9BTX7 342 aa20.57■□□□□ 0.88
COMMD1-204ENST00000445644 ZSCAN16Q9H4T2 348 aaPredicted RBP20.57■□□□□ 0.88
COMMD1-204ENST00000445644 PARVGQ9HBI0 331 aa20.57■□□□□ 0.88
COMMD1-204ENST00000445644 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.57■□□□□ 0.88
COMMD1-204ENST00000445644 TOPORSQ9NS56 1045 aaPredicted RBP20.57■□□□□ 0.88
COMMD1-204ENST00000445644 TBX20Q9UMR3 447 aa20.57■□□□□ 0.88
COMMD1-204ENST00000445644 WDFY4Q6ZS81 3184 aa20.57■□□□□ 0.88
COMMD1-204ENST00000445644 DOCK6Q96HP0 2047 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 K7ENM7 598 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 TRAK2O60296 914 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 PIGRP01833 764 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 FGFR3P22607 806 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 NMT1P30419 496 aaKnown RBP20.56■□□□□ 0.88
COMMD1-204ENST00000445644 BRCC3P46736 316 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 ZBTB41Q5SVQ8 909 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 C15orf39Q6ZRI6 1047 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 CMASQ8NFW8 434 aaPredicted RBP20.56■□□□□ 0.88
COMMD1-204ENST00000445644 ZNF707Q96C28 371 aaPredicted RBP20.56■□□□□ 0.88
COMMD1-204ENST00000445644 UROC1Q96N76 676 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 NR2E1Q9Y466 385 aa20.56■□□□□ 0.88
COMMD1-204ENST00000445644 CCDC195A0A1B0GUA6 201 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 I3L4J1 428 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 CLDN3O15551 220 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 B3GAT3O94766 335 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 TNFSF9P41273 254 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 PSMD5Q16401 504 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 PTPN21Q16825 1174 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 DCLRE1AQ6PJP8 1040 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 RSPO2Q6UXX9 243 aaPredicted RBP20.55■□□□□ 0.88
COMMD1-204ENST00000445644 HFE2Q6ZVN8 426 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 DYMQ7RTS9 669 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 STK17AQ9UEE5 414 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 DOCK8Q8NF50 2099 aa20.55■□□□□ 0.88
COMMD1-204ENST00000445644 MYMKA6NI61 221 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 SPDYE4A6NLX3 237 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 H0YCG3 227 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 C1RP00736 705 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 KRT18P05783 430 aaKnown RBP20.54■□□□□ 0.88
COMMD1-204ENST00000445644 CXCL8P10145 99 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 TKTP29401 623 aaKnown RBP20.54■□□□□ 0.88
COMMD1-204ENST00000445644 GTF2BQ00403 316 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 CREMQ03060 361 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 ELAVL2Q12926 359 aaKnown RBP20.54■□□□□ 0.88
COMMD1-204ENST00000445644 ZC2HC1CQ53FD0 456 aaPredicted RBP20.54■□□□□ 0.88
COMMD1-204ENST00000445644 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.54■□□□□ 0.88
COMMD1-204ENST00000445644 LINC00301Q8NCQ3 95 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 HDAC7Q8WUI4 952 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 DNAJC19Q96DA6 116 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 BICD1Q96G01 975 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 DDX27Q96GQ7 796 aaKnown RBP20.54■□□□□ 0.88
COMMD1-204ENST00000445644 IKZF4Q9H2S9 585 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 SMOC2Q9H3U7 446 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 ZHX3Q9H4I2 956 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 TUBGCP4Q9UGJ1 667 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 FBXW11Q9UKB1 542 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 TSC2P49815 1807 aa20.54■□□□□ 0.88
COMMD1-204ENST00000445644 NOTCH4Q99466 2003 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 TISP43B9A030 160 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 PODXLO00592 558 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 N4BP1O75113 896 aaKnown RBP20.53■□□□□ 0.88
COMMD1-204ENST00000445644 TBCAO75347 108 aaKnown RBP20.53■□□□□ 0.88
COMMD1-204ENST00000445644 LIG4P49917 911 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 SPAG1Q07617 926 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 RRAGBQ5VZM2 374 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 TRIM67Q6ZTA4 783 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 SFR1Q86XK3 245 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 MAP4K3Q8IVH8 894 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 HSCBQ8IWL3 235 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 ZDHHC14Q8IZN3 488 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 KRI1Q8N9T8 703 aaKnown RBP20.53■□□□□ 0.88
COMMD1-204ENST00000445644 TDRD5Q8NAT2 981 aaKnown RBP20.53■□□□□ 0.88
COMMD1-204ENST00000445644 KREMEN2Q8NCW0 462 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 DDX12PQ92771 950 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 RHOBTB2Q9BYZ6 727 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 PLEKHA4Q9H4M7 779 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 SLC38A7Q9NVC3 462 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 TFIP11Q9UBB9 837 aaKnown RBP20.53■□□□□ 0.88
COMMD1-204ENST00000445644 CCDC39Q9UFE4 941 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 USTQ9Y2C2 406 aa20.53■□□□□ 0.88
COMMD1-204ENST00000445644 TTC26A0AVF1 554 aa20.52■□□□□ 0.88
COMMD1-204ENST00000445644 ANKRD63C9JTQ0 380 aa20.52■□□□□ 0.88
COMMD1-204ENST00000445644 HNRNPDLO14979 420 aaKnown RBP20.52■□□□□ 0.88
COMMD1-204ENST00000445644 ASGR2P07307 311 aa20.52■□□□□ 0.88
COMMD1-204ENST00000445644 PKP1Q13835 747 aa20.52■□□□□ 0.88
COMMD1-204ENST00000445644 FOXD4L5Q5VV16 416 aaPredicted RBP20.52■□□□□ 0.88
COMMD1-204ENST00000445644 FOXD4L4Q8WXT5 416 aaPredicted RBP20.52■□□□□ 0.88
COMMD1-204ENST00000445644 ASIC4Q96FT7 647 aa20.52■□□□□ 0.88
COMMD1-204ENST00000445644 STRA6Q9BX79 667 aa20.52■□□□□ 0.88
COMMD1-204ENST00000445644 ST6GALNAC4Q9H4F1 302 aa20.52■□□□□ 0.88
COMMD1-204ENST00000445644 MTRRQ9UBK8 725 aa20.52■□□□□ 0.88
COMMD1-204ENST00000445644 ZNF318Q5VUA4 2279 aa20.51■□□□□ 0.87
COMMD1-204ENST00000445644 A0A0B4J269 797 aa20.51■□□□□ 0.87
COMMD1-204ENST00000445644 TMEM221A6NGB7 291 aa20.51■□□□□ 0.87
COMMD1-204ENST00000445644 M0R296 226 aa20.51■□□□□ 0.87
COMMD1-204ENST00000445644 PPP1R37O75864 691 aa20.51■□□□□ 0.87
COMMD1-204ENST00000445644 MATR3P43243 847 aaKnown RBP eCLIP20.51■□□□□ 0.87
COMMD1-204ENST00000445644 ZBTB6Q15916 424 aa20.51■□□□□ 0.87
COMMD1-204ENST00000445644 ENOX2Q16206 610 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms