RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CCDC195A0A1B0GUA6 201 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 TMEM221A6NGB7 291 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 TISP43B9A030 160 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 M0R296 226 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 SLC26A4O43511 780 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 STX6O43752 255 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 TOM1L1O75674 476 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 PAPLNO95428 1278 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 CXCL8P10145 99 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 KCNE1P15382 129 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 FGFR3P22607 806 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 TKTP29401 623 aaKnown RBP11.9□□□□□ -0.5
SF3A1-203ENST00000444440 NMT1P30419 496 aaKnown RBP11.9□□□□□ -0.5
SF3A1-203ENST00000444440 SPAG1Q07617 926 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 PSMD5Q16401 504 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 CMASQ8NFW8 434 aaPredicted RBP11.9□□□□□ -0.5
SF3A1-203ENST00000444440 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
SF3A1-203ENST00000444440 KCNN1Q92952 543 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 DDX27Q96GQ7 796 aaKnown RBP11.9□□□□□ -0.5
SF3A1-203ENST00000444440 ACAP3Q96P50 834 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 TTPALQ9BTX7 342 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.5
SF3A1-203ENST00000444440 TUBGCP4Q9UGJ1 667 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 ODF2LQ9ULJ1 636 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 SSX2IPQ9Y2D8 614 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 MUC6Q6W4X9 2439 aa11.9□□□□□ -0.5
SF3A1-203ENST00000444440 ZDBF2Q9HCK1 2354 aa11.9□□□□□ -0.51
SF3A1-203ENST00000444440 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 ANKRD63C9JTQ0 380 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 K7ENM7 598 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 B3GAT3O94766 335 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 PDGFBP01127 241 aaPredicted RBP11.89□□□□□ -0.51
SF3A1-203ENST00000444440 GUCY2FP51841 1108 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 MCL1Q07820 350 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 STRN3Q13033 797 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 ZC2HC1CQ53FD0 456 aaPredicted RBP11.89□□□□□ -0.51
SF3A1-203ENST00000444440 ATAT1Q5SQI0 421 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 ZPBP2Q6X784 338 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 C15orf39Q6ZRI6 1047 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 DYMQ7RTS9 669 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 GPR65Q8IYL9 337 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 MYCT1Q8N699 235 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
SF3A1-203ENST00000444440 KREMEN2Q8NCW0 462 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 SNX21Q969T3 373 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 TCHPQ9BT92 498 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 FGFBP2Q9BYJ0 223 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
SF3A1-203ENST00000444440 LARSQ9P2J5 1176 aaKnown RBP11.89□□□□□ -0.51
SF3A1-203ENST00000444440 LIMD1Q9UGP4 676 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 FBXW11Q9UKB1 542 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 NR2E1Q9Y466 385 aa11.89□□□□□ -0.51
SF3A1-203ENST00000444440 KIF26AQ9ULI4 1882 aaPredicted RBP11.89□□□□□ -0.51
SF3A1-203ENST00000444440 TTC26A0AVF1 554 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 MYMKA6NI61 221 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 PODXLO00592 558 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 CLDN3O15551 220 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 FAM13AO94988 1023 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 PIGRP01833 764 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 DDIT3P35638 169 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 SMTNP53814 917 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 YARSP54577 528 aaKnown RBP11.88□□□□□ -0.51
SF3A1-203ENST00000444440 PKP1Q13835 747 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 SLC39A14Q15043 492 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-203ENST00000444440 DCLRE1AQ6PJP8 1040 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-203ENST00000444440 CCDC149Q6ZUS6 474 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 SFR1Q86XK3 245 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 ZDHHC14Q8IZN3 488 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 RASSF8Q8NHQ8 419 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-203ENST00000444440 DNAJC19Q96DA6 116 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 MYADMQ96S97 322 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 ZHX3Q9H4I2 956 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 TOPORSQ9NS56 1045 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-203ENST00000444440 MTRRQ9UBK8 725 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 COL4A2P08572 1712 aa11.88□□□□□ -0.51
SF3A1-203ENST00000444440 CLUHO75153 1309 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 ZNF638Q14966 1978 aaKnown RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 TRAK2O60296 914 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 PPP1R37O75864 691 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 OR1D2P34982 312 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 NASPP49321 788 aaPredicted RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 LIG4P49917 911 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 CASP5P51878 434 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 VCPP55072 806 aaKnown RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 NTHL1P78549 312 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 GTF2BQ00403 316 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 SIGLEC14Q08ET2 396 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 KCNA1Q09470 495 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 ZBTB6Q15916 424 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 ENOX2Q16206 610 aaKnown RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 IER5LQ5T953 404 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 APBB1IPQ7Z5R6 666 aaPredicted RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 MAP4K3Q8IVH8 894 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 HSCBQ8IWL3 235 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms