RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 UBN1Q9NPG3 1134 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 SNTG2Q9NY99 539 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 KCNK4Q9NYG8 393 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 GABBR1Q9UBS5 961 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 TTC41PQ6P2S7 1318 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 DOPEY2Q9Y3R5 2298 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 TEX51A0A1B0GUA7 166 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 RNF40O75150 1001 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 MICAL2O94851 1124 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 APBB3O95704 486 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 CD59P13987 128 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 FCHO2Q0JRZ9 810 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 MCMDC2Q4G0Z9 681 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 CEP55Q53EZ4 464 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 TOGARAM2Q6ZUX3 1019 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 SMG8Q8ND04 991 aaKnown RBP15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 ZFYVE19Q96K21 471 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 FAM167AQ96KS9 214 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 TMEM209Q96SK2 561 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 TPSD1Q9BZJ3 242 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 TRPV4Q9HBA0 871 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 POLMQ9NP87 494 aaPredicted RBP15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 TMEM74BQ9NUR3 256 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 CACNG4Q9UBN1 327 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 EBF1Q9UH73 591 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 DNMT3LQ9UJW3 386 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 ABCA12Q86UK0 2595 aa15.95■□□□□ 0.14
SYNCRIP-203ENST00000444272 B8ZZF3 427 aa15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 SH3BP5O60239 455 aa15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 GJA1P17302 382 aa15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 CDC42EP1Q00587 391 aa15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 SEC23AQ15436 765 aa15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 USP39Q53GS9 565 aaKnown RBP15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 SLC23A3Q6PIS1 610 aa15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 SRPK3Q9UPE1 567 aa15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 APOBEC2Q9Y235 224 aaKnown RBP15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 ATXN2Q99700 1313 aaKnown RBP15.94■□□□□ 0.14
SYNCRIP-203ENST00000444272 CFIP05156 583 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 FSTL4Q6MZW2 842 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 ARMCX6Q7L4S7 300 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 TMPRSS7Q7RTY8 843 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 GPR155Q7Z3F1 870 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 KRT25Q7Z3Z0 450 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 SLCO6A1Q86UG4 719 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 ZNF410Q86VK4 478 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 RHPN2Q8IUC4 686 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 E2F7Q96AV8 911 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 IPPQ9Y573 584 aa15.93■□□□□ 0.14
SYNCRIP-203ENST00000444272 DHX15O43143 795 aaKnown RBP15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 SLC28A2O43868 658 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 MOSPD3O75425 235 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 OATP04181 439 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 PSAPP07602 524 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 CSRP3P50461 194 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 HSP90AA2PQ14568 343 aaPredicted RBP15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 TAF1BQ53T94 588 aaPredicted RBP15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 CYP4A22Q5TCH4 519 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 SYT12Q8IV01 421 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 GPIHBP1Q8IV16 184 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 KSR1Q8IVT5 923 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 MINDY1Q8N5J2 469 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 CNNM3Q8NE01 707 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 OR2I1PQ8NGU4 316 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 SPIRE2Q8WWL2 714 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 PGBD1Q96JS3 809 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 NLRP4Q96MN2 994 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 PAAF1Q9BRP4 392 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 SLITRK6Q9H5Y7 841 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 ZBTB40Q9NUA8 1239 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 HES2Q9Y543 173 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 CDY1Q9Y6F8 540 aa15.92■□□□□ 0.14
SYNCRIP-203ENST00000444272 MEIS1O00470 390 aa15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 TNK2Q07912 1038 aa15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 SPIRE1Q08AE8 756 aa15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 GRSF1Q12849 480 aaKnown RBP eCLIP15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 LRRC69Q6ZNQ3 347 aa15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 HS6ST3Q8IZP7 471 aa15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 NRBP2Q9NSY0 501 aa15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 SEC63Q9UGP8 760 aaKnown RBP15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 SEPT9Q9UHD8 586 aaPredicted RBP15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 TCEAL9Q9UHQ7 104 aa15.91■□□□□ 0.14
SYNCRIP-203ENST00000444272 PCDH15Q96QU1 1955 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 ARHGEF37A1IGU5 675 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 HOXA11P31270 313 aaPredicted RBP15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 PRKCEQ02156 737 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 DMC1Q14565 340 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 TEAD2Q15562 447 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 TMEM196Q5HYL7 178 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 HAUS6Q7Z4H7 955 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 RPLP0P6Q8NHW5 317 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 KRT23Q9C075 422 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 SEMA4CQ9C0C4 833 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 PCDHA10Q9Y5I2 948 aa15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 GOLGA4Q13439 2230 aaKnown RBP15.9■□□□□ 0.14
SYNCRIP-203ENST00000444272 GON4LQ3T8J9 2241 aa15.89■□□□□ 0.13
SYNCRIP-203ENST00000444272 ERVH48-1M5A8F1 160 aa15.89■□□□□ 0.13
SYNCRIP-203ENST00000444272 PRRG1O14668 218 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms