RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 PNMA5Q96PV4 448 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 FNBP1Q96RU3 617 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 CHST7Q9NS84 486 aa8.27□□□□□ -1.09
SSXP3-201ENST00000442971 DBNLQ9UJU6 430 aaKnown RBP8.27□□□□□ -1.09
SSXP3-201ENST00000442971 APCP25054 2843 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 NCANO14594 1321 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 ATRQ13535 2644 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 AKAP9Q99996 3911 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 A1L4Q6 167 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 K7ENP7 123 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 EFEMP2O95967 443 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 PCBP4P57723 403 aaKnown RBP8.26□□□□□ -1.09
SSXP3-201ENST00000442971 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
SSXP3-201ENST00000442971 GRSF1Q12849 480 aaKnown RBP eCLIP8.26□□□□□ -1.09
SSXP3-201ENST00000442971 TTF1Q15361 905 aaPredicted RBP8.26□□□□□ -1.09
SSXP3-201ENST00000442971 C1QL3Q5VWW1 255 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 FSTL4Q6MZW2 842 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 INO80CQ6PI98 192 aaPredicted RBP8.26□□□□□ -1.09
SSXP3-201ENST00000442971 MTHFD1LQ6UB35 978 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 KIAA0319LQ8IZA0 1049 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 TSTD1Q8NFU3 115 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 SLC7A14Q8TBB6 771 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 B3GALT6Q96L58 329 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 PPP1R16BQ96T49 567 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 CLSTN3Q9BQT9 956 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 TMEM175Q9BSA9 504 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 EPN3Q9H201 632 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 SMARCAD1Q9H4L7 1026 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 AVENQ9NQS1 362 aaPredicted RBP8.26□□□□□ -1.09
SSXP3-201ENST00000442971 TLR7Q9NYK1 1049 aaKnown RBP8.26□□□□□ -1.09
SSXP3-201ENST00000442971 GTSE1Q9NYZ3 720 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 DKK3Q9UBP4 350 aa8.26□□□□□ -1.09
SSXP3-201ENST00000442971 PTPRCP08575 1304 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 PTPRDP23468 1912 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 MYLKQ15746 1914 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 CEP192Q8TEP8 1941 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 WDR27A2RRH5 827 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 HEPACAM2A8MVW5 462 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 SPATA31C2B4DYI2 1134 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 KLK10O43240 276 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 OFD1O75665 1012 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 CCND2P30279 289 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 TFAP4Q01664 338 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 CREMQ03060 361 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 TARDBPQ13148 414 aaKnown RBP eCLIP8.25□□□□□ -1.09
SSXP3-201ENST00000442971 PTPRNQ16849 979 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 LINC00303Q3SY05 128 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 GNPTABQ3T906 1256 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 LONRF3Q496Y0 759 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 SLFNL1Q499Z3 407 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 TMEM196Q5HYL7 178 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 RRP12Q5JTH9 1297 aaKnown RBP8.25□□□□□ -1.09
SSXP3-201ENST00000442971 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 AXDND1Q5T1B0 1012 aaPredicted RBP8.25□□□□□ -1.09
SSXP3-201ENST00000442971 RASSF3Q86WH2 238 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 PI4K2BQ8TCG2 481 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 RHBDD1Q8TEB9 315 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 TNPO1Q92973 898 aaKnown RBP8.25□□□□□ -1.09
SSXP3-201ENST00000442971 LPPQ93052 612 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 ZSWIM3Q96MP5 696 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
SSXP3-201ENST00000442971 MARCH5Q9NX47 278 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 EVPLQ92817 2033 aa8.25□□□□□ -1.09
SSXP3-201ENST00000442971 WIPF3A6NGB9 483 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 TNFSF14O43557 240 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 AGFG2O95081 481 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 SFTPCP11686 197 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 P2RY2P41231 377 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 PTH1RQ03431 593 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 MTX1Q13505 466 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 NCAPHQ15003 741 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 LMBRD2Q68DH5 695 aaPredicted RBP8.24□□□□□ -1.09
SSXP3-201ENST00000442971 ANO7Q6IWH7 933 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 STOX1Q6ZVD7 989 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 ARID3BQ8IVW6 561 aaPredicted RBP8.24□□□□□ -1.09
SSXP3-201ENST00000442971 GPR65Q8IYL9 337 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 RPLP0P6Q8NHW5 317 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 RLN3Q8WXF3 142 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 CNOT6LQ96LI5 555 aaKnown RBP8.24□□□□□ -1.09
SSXP3-201ENST00000442971 FAM193BQ96PV7 902 aaPredicted RBP8.24□□□□□ -1.09
SSXP3-201ENST00000442971 SEMA3CQ99985 751 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 TRPV4Q9HBA0 871 aa8.24□□□□□ -1.09
SSXP3-201ENST00000442971 PRG3Q9Y2Y8 225 aaPredicted RBP8.24□□□□□ -1.09
SSXP3-201ENST00000442971 PCSK5Q92824 1860 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 GSTTP1A0A1W2PQM5 241 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 MEIS3P2A8K0S8 358 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 EGFP01133 1207 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 KLRC1P26715 233 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 OXCT1P55809 520 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 CLDN6P56747 220 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 FCHO2Q0JRZ9 810 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 PRSS36Q5K4E3 855 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 DHX40Q8IX18 779 aaKnown RBP8.23□□□□□ -1.09
SSXP3-201ENST00000442971 FRMD1Q8N878 549 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 OLIG1Q8TAK6 271 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 KCNE4Q8WWG9 221 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 SEPT1Q8WYJ6 367 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 ACDQ96AP0 544 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 E2F7Q96AV8 911 aa8.23□□□□□ -1.09
SSXP3-201ENST00000442971 TCEAL4Q96EI5 215 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms