RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 CNTN3Q9P232 1028 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 TUBGCP4Q9UGJ1 667 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 HOOK1Q9UJC3 728 aaKnown RBP13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 ADAM28Q9UKQ2 775 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 UBE4BO95155 1302 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 PRUNE2Q8WUY3 3088 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 REV3LO60673 3130 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 TCF20Q9UGU0 1960 aaKnown RBP13.27□□□□□ -0.28
SLC48A1-202ENST00000442892 MEFVO15553 781 aaPredicted RBP13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 B3GAT3O94766 335 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 ADSSP30520 456 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 CLCNKBP51801 687 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 GUCY2FP51841 1108 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 SOX4Q06945 474 aaPredicted RBP13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 HYAL1Q12794 435 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 STK4Q13043 487 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 SNW1Q13573 536 aaKnown RBP13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 CLUL1Q15846 466 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 JADE1Q6IE81 842 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 FUT10Q6P4F1 479 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 TMEM130Q8N3G9 435 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 KIAA0895Q8NCT3 520 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 ZNF507Q8TCN5 953 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 SCFD1Q8WVM8 642 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 VN1R3Q9BXE9 311 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 ZBP1Q9H171 429 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 NGRNQ9NPE2 291 aaKnown RBP13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 THEGQ9P2T0 379 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 CPSF3Q9UKF6 684 aaKnown RBP13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 MAPK8IP1Q9UQF2 711 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 VWA8A3KMH1 1905 aa13.27□□□□□ -0.29
SLC48A1-202ENST00000442892 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 I3L4J1 428 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 PODXLO00592 558 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 FSCN2O14926 492 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 LINC01565O15544 149 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 XPOTO43592 962 aaKnown RBP13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 FAM189A1O60320 539 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 SF3B1O75533 1304 aaKnown RBP eCLIP13.26□□□□□ -0.291e-19■■■■■ 448
SLC48A1-202ENST00000442892 SMC2O95347 1197 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 NFICP08651 508 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 KCNE1P15382 129 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 GARTP22102 1010 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 KCNA5P22460 613 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 NDUFV1P49821 464 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 UBE2HP62256 183 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 TFF2Q03403 129 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 EHHADHQ08426 723 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 PSMD2Q13200 908 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 TMEM132DQ14C87 1099 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 NAB2Q15742 525 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 PDE12Q6L8Q7 609 aaKnown RBP13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 ALKAL1Q6UXT8 129 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 EPM2AIP1Q7L775 607 aaPredicted RBP13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 TAS1R1Q7RTX1 841 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 GLYCTKQ8IVS8 523 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 GPD1LQ8N335 351 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 RDH13Q8NBN7 331 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 ENGASEQ8NFI3 743 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 HLA-CQ95604 372 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 SMARCE1Q969G3 411 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 UROC1Q96N76 676 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 HERC2P3Q9BVR0 1158 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 PLEKHA5Q9HAU0 1116 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 MRPL17Q9NRX2 175 aaKnown RBP13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 RBAKQ9NYW8 714 aaPredicted RBP13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 HSPBP1Q9NZL4 362 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 NUB1Q9Y5A7 615 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 STYXL1Q9Y6J8 313 aa13.26□□□□□ -0.29
SLC48A1-202ENST00000442892 PLXNA3P51805 1871 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 TTC26A0AVF1 554 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 C2orf71A6NGG8 1288 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 H3BQ06 376 aaPredicted RBP13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 EXTL3O43909 919 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 LDHAP00338 332 aaKnown RBP13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 SOD2P04179 222 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 CTSAP10619 480 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 MCM4P33991 863 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 HOXD13P35453 343 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 BRCC3P46736 316 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 GLUD2P49448 558 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 KNOP1Q1ED39 458 aaKnown RBP13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 XKR4Q5GH76 650 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 FAM171A1Q5VUB5 890 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 ISM2Q6H9L7 571 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 SMYD4Q8IYR2 804 aaPredicted RBP13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 BEST2Q8NFU1 509 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 RIN2Q8WYP3 895 aaPredicted RBP13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 GBP4Q96PP9 640 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 GPR62Q9BZJ7 368 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 UBE2ZQ9H832 354 aaPredicted RBP13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 AGPAT3Q9NRZ7 376 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 RMND1Q9NWS8 449 aa13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 UBQLN1Q9UMX0 589 aaKnown RBP13.25□□□□□ -0.29
SLC48A1-202ENST00000442892 SCN1AP35498 2009 aa13.24□□□□□ -0.29
SLC48A1-202ENST00000442892 RHOBTB3O94955 611 aa13.24□□□□□ -0.29
SLC48A1-202ENST00000442892 CLSTN1O94985 981 aa13.24□□□□□ -0.29
SLC48A1-202ENST00000442892 KIF20AO95235 890 aa13.24□□□□□ -0.29
SLC48A1-202ENST00000442892 IGFBP6P24592 240 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms