RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 USTQ9Y2C2 406 aa20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 TRAK2O60296 914 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 B3GAT3O94766 335 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 FAM13AO94988 1023 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 PIGRP01833 764 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 SCP2P22307 547 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 FGFR3P22607 806 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 NASPP49321 788 aaPredicted RBP20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 SEZ6Q53EL9 994 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 MYCT1Q8N699 235 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 RASSF8Q8NHQ8 419 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 PLEKHA4Q9H4M7 779 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 DPP7Q9UHL4 492 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 TBX20Q9UMR3 447 aa20.69■□□□□ 0.9
HMGB3P22-201ENST00000442010 CLDN3O15551 220 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 FAM189A1O60320 539 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 RFPL2O75678 378 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 SPATA31D3P0C874 917 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 HARSP12081 509 aaKnown RBP20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 GTF2BQ00403 316 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 PTPN21Q16825 1174 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 CYP26C1Q6V0L0 522 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 TRIM67Q6ZTA4 783 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 SPATA31D4Q6ZUB0 917 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 HFE2Q6ZVN8 426 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 CEP57Q86XR8 500 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 GLYCTKQ8IVS8 523 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 ZDHHC14Q8IZN3 488 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 ZNF707Q96C28 371 aaPredicted RBP20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 SLC38A7Q9NVC3 462 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 STK17AQ9UEE5 414 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 CCDC39Q9UFE4 941 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 ZDBF2Q9HCK1 2354 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 NOTCH4Q99466 2003 aa20.68■□□□□ 0.9
HMGB3P22-201ENST00000442010 CCDC195A0A1B0GUA6 201 aa20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 SPDYE4A6NLX3 237 aa20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 K7ENM7 598 aa20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 MYBP10242 640 aa20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 PSMD5Q16401 504 aa20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 DDX27Q96GQ7 796 aaKnown RBP20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 FBXW11Q9UKB1 542 aa20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 ARIH1Q9Y4X5 557 aaPredicted RBP20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
HMGB3P22-201ENST00000442010 ADAM12O43184 909 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 KRT18P05783 430 aaKnown RBP20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 NMT1P30419 496 aaKnown RBP20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 BRCC3P46736 316 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 SLC39A4Q6P5W5 647 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 PDXDC1Q6P996 788 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 ELMSAN1Q6PJG2 1045 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 CCDC149Q6ZUS6 474 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 BMP8AQ7Z5Y6 402 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 KRI1Q8N9T8 703 aaKnown RBP20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 TDRD5Q8NAT2 981 aaKnown RBP20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 LINC00301Q8NCQ3 95 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 KREMEN2Q8NCW0 462 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 C18orf25Q96B23 403 aaPredicted RBP20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 ST6GALNAC4Q9H4F1 302 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 WDR6Q9NNW5 1121 aaKnown RBP20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 ZDHHC7Q9NXF8 308 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 KMT2EQ8IZD2 1858 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 MUC6Q6W4X9 2439 aa20.66■□□□□ 0.9
HMGB3P22-201ENST00000442010 A0A087X0B3 334 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 TTC26A0AVF1 554 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 PODXLO00592 558 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 TBCAO75347 108 aaKnown RBP20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 CXCL8P10145 99 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 TKTP29401 623 aaKnown RBP20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 RPL9P32969 192 aaKnown RBP20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 TNFSF9P41273 254 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 LIG4P49917 911 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 SIGLEC14Q08ET2 396 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 RRAGBQ5VZM2 374 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 RSPO2Q6UXX9 243 aaPredicted RBP20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 MAP4K3Q8IVH8 894 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 PLCD3Q8N3E9 789 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 DNAJC19Q96DA6 116 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 ASIC4Q96FT7 647 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 PLEKHA5Q9HAU0 1116 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 MTRRQ9UBK8 725 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 HCN4Q9Y3Q4 1203 aa20.65■□□□□ 0.9
HMGB3P22-201ENST00000442010 TMEM221A6NGB7 291 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 MYMKA6NI61 221 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 I3L4J1 428 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 M0R296 226 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 HNRNPDLO14979 420 aaKnown RBP20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 N4BP1O75113 896 aaKnown RBP20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 ZMYND10O75800 440 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 ADRB2P07550 413 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 CLTAP09496 248 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 RAB33AQ14088 237 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 ZBTB6Q15916 424 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 ZBTB41Q5SVQ8 909 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 DYMQ7RTS9 669 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 DDX12PQ92771 950 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 BICD1Q96G01 975 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 STRA6Q9BX79 667 aa20.64■□□□□ 0.89
HMGB3P22-201ENST00000442010 PRKD2Q9BZL6 878 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms