RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 BCL6BQ8N143 479 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 FAM26EQ8N5C1 309 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 BRIX1Q8TDN6 353 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 BCL7CQ8WUZ0 217 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 TSPAN17Q96FV3 270 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 SUCLG2Q96I99 432 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 HEPHQ9BQS7 1158 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 TRIM54Q9BYV2 358 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 MRPL46Q9H2W6 279 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 LDAHQ9H6V9 325 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 MANSC1Q9H8J5 431 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 CNNM1Q9NRU3 951 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 POLR3BQ9NW08 1133 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 CALCOCO1Q9P1Z2 691 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 IFT80Q9P2H3 777 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 FBXO2Q9UK22 296 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 HDAC5Q9UQL6 1122 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 MAN2B2Q9Y2E5 1009 aa4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 CTDP1Q9Y5B0 961 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-207ENST00000441725 AQP12BA6NM10 295 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 TISP43B9A030 160 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 B9A039 149 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 PRDX5P30044 214 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 ARL4CP56559 192 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 MPP1Q00013 466 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 MEF2AQ02078 507 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 RETSATQ6NUM9 610 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 RPTNQ6XPR3 784 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 GADL1Q6ZQY3 521 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 AMIGO3Q86WK7 504 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 SNX33Q8WV41 574 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 USP13Q92995 863 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 NMD3Q96D46 503 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 IQCDQ96DY2 449 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 ZSCAN31Q96LW9 406 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 TACO1Q9BSH4 297 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 C1orf43Q9BWL3 253 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 WDCPQ9H6R7 721 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 JADE2Q9NQC1 790 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 IPO5O00410 1097 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 SYT5O00445 386 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 PHF2O75151 1096 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 CD4P01730 458 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 HPXP02790 462 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 CKMT1AP12532 417 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 HNRNPLP14866 589 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 HDCP19113 662 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 SERPINF1P36955 418 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 SREBF1P36956 1147 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 PER3P56645 1201 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 SOX8P57073 446 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 SPARCL1Q14515 664 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 UBE3CQ15386 1083 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 TOMM20Q15388 145 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 TAF12Q16514 161 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 LIN54Q6MZP7 749 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 PQLC1Q8N2U9 271 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 TTC30BQ8N4P2 665 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 FANCBQ8NB91 859 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 WDR48Q8TAF3 677 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 ASB12Q8WXK4 309 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 SNX22Q96L94 193 aa4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 SEC62Q99442 399 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 OSBPL5Q9H0X9 879 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-207ENST00000441725 FAM234BA2RU67 622 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 F2RL2O00254 374 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 ADCY6O43306 1168 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 MAFO75444 373 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 POLBP06746 335 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 LTA4HP09960 611 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 SCP2P22307 547 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 CNTFP26441 200 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 GLRBP48167 497 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 EIF5P55010 431 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 EXOSC9Q06265 439 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 FOXO1Q12778 655 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 ADAM9Q13443 819 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 TIGD6Q17RP2 521 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 CFAP161Q6P656 301 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 FAM90A1Q86YD7 464 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 GALNT15Q8N3T1 639 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 MSL3Q8N5Y2 521 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 CCDC89Q8N998 374 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 DTX3Q8N9I9 347 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 PIK3C3Q8NEB9 887 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 FBXO18Q8NFZ0 1043 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 ARHGAP20Q9P2F6 1191 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 ITGB1BP2Q9UKP3 347 aa4.76□□□□□ -1.65
CDC42BPA-207ENST00000441725 TRIM43BA6NCK2 446 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 H0Y858 1186 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 NDST3O95803 873 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 TGFB1P01137 390 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 MT-ND5P03915 603 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ANXA2P07355 339 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 FTH1P19P0C7X4 201 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 DDCP20711 480 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 CAPN3P20807 821 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 PCSK1P29120 753 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ADCY8P40145 1251 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ERVFRD-1P60508 538 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms