RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 AKT3Q9Y243 479 aa14.15□□□□□ -0.14
CPSF4-206ENST00000441580 PCDHB2Q9Y5E7 798 aa14.15□□□□□ -0.14
CPSF4-206ENST00000441580 ANK1P16157 1881 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-206ENST00000441580 TULP1O00294 542 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-206ENST00000441580 PDE2AO00408 941 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-206ENST00000441580 IGF2BP3O00425 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
CPSF4-206ENST00000441580 B4GALT4O60513 344 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 CLSTN1O94985 981 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 SGPL1O95470 568 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 VNN1O95497 513 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 TNNC2P02585 160 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 RHOXF2BP0C7M4 288 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 TMEM191BP0C7N4 346 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 MYBL1P10243 752 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 RGS2P41220 211 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 WNT7BP56706 349 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 TNNC1P63316 161 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 GPC5P78333 572 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 C2orf54Q08AI8 447 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 GLE1Q53GS7 698 aaKnown RBP14.14□□□□□ -0.15
CPSF4-206ENST00000441580 TMEM63BQ5T3F8 832 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 LMBRD2Q68DH5 695 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-206ENST00000441580 RGMBQ6NW40 437 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 MTHFD1LQ6UB35 978 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 ILDR2Q71H61 639 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 ZBTB33Q86T24 672 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 SLC47A2Q86VL8 602 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 SPATA4Q8NEY3 305 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 FAXDC2Q96IV6 333 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 ANKRD36BP1Q96IX9 119 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 RHOXF2Q9BQY4 288 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 PI4K2AQ9BTU6 479 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 NIF3L1Q9GZT8 377 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 THAP2Q9H0W7 228 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 CDT1Q9H211 546 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 UVRAGQ9P2Y5 699 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 AMFRQ9UKV5 643 aa14.14□□□□□ -0.15
CPSF4-206ENST00000441580 TMCO5BA8MYB1 307 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 MIF4GDA9UHW6 222 aaKnown RBP14.13□□□□□ -0.15
CPSF4-206ENST00000441580 PGRMC1O00264 195 aaKnown RBP14.13□□□□□ -0.15
CPSF4-206ENST00000441580 ZRANB2O95218 330 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPSF4-206ENST00000441580 F2P00734 622 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 ASS1P00966 412 aaKnown RBP14.13□□□□□ -0.15
CPSF4-206ENST00000441580 MMEP08473 750 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 CHRNB2P17787 502 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 CDC42EP1Q00587 391 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 PCBP1Q15365 356 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPSF4-206ENST00000441580 DUOXA2Q1HG44 320 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 CLEC16AQ2KHT3 1053 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 TAF3Q5VWG9 929 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 C8orf74Q6P047 294 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 NT5DC3Q86UY8 548 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 PALB2Q86YC2 1186 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 SLC35G2Q8TBE7 412 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 TATDN2Q93075 761 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 ZNF653Q96CK0 615 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 SCLT1Q96NL6 688 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 PNKPQ96T60 521 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 MTMR12Q9C0I1 747 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 RPF1Q9H9Y2 349 aaKnown RBP14.13□□□□□ -0.15
CPSF4-206ENST00000441580 TAS2R14Q9NYV8 317 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 OGFRQ9NZT2 677 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 CTTNBP2NLQ9P2B4 639 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 CNTN6Q9UQ52 1028 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 STXBP5LQ9Y2K9 1186 aa14.13□□□□□ -0.15
CPSF4-206ENST00000441580 KCNK3O14649 394 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 BUB1BO60566 1050 aaPredicted RBP14.12□□□□□ -0.15
CPSF4-206ENST00000441580 ERLIN2O94905 339 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 FTLP02792 175 aaPredicted RBP14.12□□□□□ -0.15
CPSF4-206ENST00000441580 CYP1A2P05177 515 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 TNFSF9P41273 254 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 CPT1AP50416 773 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 VSNL1P62760 191 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 TRPC3Q13507 836 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 DCAF4L1Q3SXM0 396 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 TLK2Q86UE8 772 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 IFNL1Q8IU54 200 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 OR5B17Q8NGF7 314 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 ACTRT1Q8TDG2 376 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 DDX1Q92499 740 aaKnown RBP14.12□□□□□ -0.15
CPSF4-206ENST00000441580 ARHGEF26Q96DR7 871 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 HES6Q96HZ4 224 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 PSMB7Q99436 277 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 ADPGKQ9BRR6 497 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 IFT122Q9HBG6 1241 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 ZFYVE28Q9HCC9 887 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 ABCB6Q9NP58 842 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 AVENQ9NQS1 362 aaPredicted RBP14.12□□□□□ -0.15
CPSF4-206ENST00000441580 ZNF446Q9NWS9 450 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 Q9Y3F1 56 aa14.12□□□□□ -0.15
CPSF4-206ENST00000441580 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 A6NJR5 290 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 TTLL13PA6NNM8 815 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 CCDC188H7C350 402 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 B4GALT5O43286 388 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 ACO1P21399 889 aaKnown RBP14.11□□□□□ -0.15
CPSF4-206ENST00000441580 TNFRSF8P28908 595 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 CXCR5P32302 372 aa14.11□□□□□ -0.15
CPSF4-206ENST00000441580 CENPCQ03188 943 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms