RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 GOLGA8JA6NMD2 632 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 PER2O15055 1255 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 LINC01565O15544 149 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 EFEMP2O95967 443 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 CLCNKBP51801 687 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 STK4Q13043 487 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 PNOCQ13519 176 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 POSTNQ15063 836 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 PDE12Q6L8Q7 609 aaKnown RBP19.63■□□□□ 0.73
CPSF4-205ENST00000440514 ARMCX5Q6P1M9 558 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 FUT10Q6P4F1 479 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 CRELD2Q6UXH1 353 aaPredicted RBP19.63■□□□□ 0.73
CPSF4-205ENST00000440514 TAS1R1Q7RTX1 841 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.63■□□□□ 0.73
CPSF4-205ENST00000440514 RNF168Q8IYW5 571 aaPredicted RBP19.63■□□□□ 0.73
CPSF4-205ENST00000440514 NOC3LQ8WTT2 800 aaKnown RBP19.63■□□□□ 0.73
CPSF4-205ENST00000440514 PPP2R3CQ969Q6 453 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 KIF12Q96FN5 646 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 B3GALT6Q96L58 329 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 FAM213AQ9BRX8 229 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 GPR62Q9BZJ7 368 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 UBE2ZQ9H832 354 aaPredicted RBP19.63■□□□□ 0.73
CPSF4-205ENST00000440514 PLEKHA5Q9HAU0 1116 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 NGRNQ9NPE2 291 aaKnown RBP19.63■□□□□ 0.73
CPSF4-205ENST00000440514 SLC38A7Q9NVC3 462 aa19.63■□□□□ 0.73
CPSF4-205ENST00000440514 C2orf71A6NGG8 1288 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 SOD2P04179 222 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 CTSAP10619 480 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 GARTP22102 1010 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 TFF2Q03403 129 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 PTPN14Q15678 1187 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 BMT2Q1RMZ1 405 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 EP400NLQ6ZTU2 488 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 C3orf58Q8NDZ4 430 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 HLA-CQ95604 372 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 UROC1Q96N76 676 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 TLE6Q9H808 572 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 CLDND1Q9NY35 253 aa19.62■□□□□ 0.73
CPSF4-205ENST00000440514 SF3B1O75533 1304 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■■■ 112
CPSF4-205ENST00000440514 PODXLO00592 558 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 TGFB1I1O43294 461 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 TADA2AO75478 443 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 CXCL14O95715 111 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 NFICP08651 508 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 GUCY2FP51841 1108 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 RBM10P98175 930 aaKnown RBP19.61■□□□□ 0.73
CPSF4-205ENST00000440514 COL19A1Q14993 1142 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 DUSP6Q16828 381 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 UPP1Q16831 310 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 JADE1Q6IE81 842 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 KANK3Q6NY19 840 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 MRPL43Q8N983 215 aaKnown RBP19.61■□□□□ 0.73
CPSF4-205ENST00000440514 ERCC4Q92889 916 aaPredicted RBP19.61■□□□□ 0.73
CPSF4-205ENST00000440514 AGPAT3Q9NRZ7 376 aa19.61■□□□□ 0.73
CPSF4-205ENST00000440514 BRWD1Q9NSI6 2320 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 TMEM189-UBE2V1I3L0A0 370 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 C2CD2LO14523 706 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 TBX10O75333 385 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 RHOBTB3O94955 611 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 GLP2RO95838 553 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 URODP06132 367 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 ADRB2P07550 413 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 GLUD2P49448 558 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 WNT7BP56706 349 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 PSMD2Q13200 908 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 CD300LGQ6UXG3 332 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 VN1R2Q8NFZ6 395 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 CCDC47Q96A33 483 aaKnown RBP19.6■□□□□ 0.73
CPSF4-205ENST00000440514 PABPC5Q96DU9 382 aaKnown RBP19.6■□□□□ 0.73
CPSF4-205ENST00000440514 HSPBP1Q9NZL4 362 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 COG5Q9UP83 839 aa19.6■□□□□ 0.73
CPSF4-205ENST00000440514 VWA8A3KMH1 1905 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 PRUNE2Q8WUY3 3088 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 I3L4J1 428 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 TULP1O00294 542 aaPredicted RBP19.59■□□□□ 0.73
CPSF4-205ENST00000440514 CLIC2O15247 247 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 EXTL3O43909 919 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 KINO60870 393 aaKnown RBP19.59■□□□□ 0.73
CPSF4-205ENST00000440514 B3GAT3O94766 335 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 KCNA5P22460 613 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 BRCC3P46736 316 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 BMS1Q14692 1282 aaKnown RBP19.59■□□□□ 0.73
CPSF4-205ENST00000440514 KNOP1Q1ED39 458 aaKnown RBP19.59■□□□□ 0.73
CPSF4-205ENST00000440514 CTC1Q2NKJ3 1217 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 LLGL2Q6P1M3 1020 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 BRSK2Q8IWQ3 736 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 GPD1LQ8N335 351 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 EFHBQ8N7U6 833 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 TIGD1Q96MW7 591 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 RBAKQ9NYW8 714 aaPredicted RBP19.59■□□□□ 0.73
CPSF4-205ENST00000440514 STK39Q9UEW8 545 aa19.59■□□□□ 0.73
CPSF4-205ENST00000440514 UBQLN1Q9UMX0 589 aaKnown RBP19.59■□□□□ 0.73
CPSF4-205ENST00000440514 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-205ENST00000440514 H3BQ06 376 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-205ENST00000440514 PRPF40AO75400 957 aaKnown RBP19.58■□□□□ 0.72
CPSF4-205ENST00000440514 LDHAP00338 332 aaKnown RBP19.58■□□□□ 0.72
CPSF4-205ENST00000440514 LTBRP36941 435 aa19.58■□□□□ 0.72
CPSF4-205ENST00000440514 CYP2J2P51589 502 aa19.58■□□□□ 0.72
CPSF4-205ENST00000440514 UBE2HP62256 183 aa19.58■□□□□ 0.72
CPSF4-205ENST00000440514 DLX2Q07687 328 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms