RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 TDRD10Q5VZ19 366 aaKnown RBP14.17□□□□□ -0.14
ACTN4-204ENST00000440400 IQSEC1Q6DN90 963 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 H2AFVQ71UI9 128 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.17□□□□□ -0.14
ACTN4-204ENST00000440400 CPSF3Q9UKF6 684 aaKnown RBP14.17□□□□□ -0.14
ACTN4-204ENST00000440400 PASKQ96RG2 1323 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 MAGEB2O15479 319 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 NEBLO76041 1014 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 ARID5AQ03989 594 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 AMHR2Q16671 573 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 FAXDC2Q96IV6 333 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 NT5C1BQ96P26 610 aa14.17□□□□□ -0.14
ACTN4-204ENST00000440400 POP1Q99575 1024 aaKnown RBP14.17□□□□□ -0.14
ACTN4-204ENST00000440400 TARS2Q9BW92 718 aaKnown RBP14.17□□□□□ -0.14
ACTN4-204ENST00000440400 ANKRD62A6NC57 917 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 ACKR2O00590 384 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 ACO1P21399 889 aaKnown RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 TFDP1Q14186 410 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 WDR49Q8IV35 697 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 RFFLQ8WZ73 363 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 GLG1Q92896 1179 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 BICD1Q96G01 975 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 RNPEPQ9H4A4 650 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 TMEM59LQ9UK28 342 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 MYH10P35580 1976 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 MANSC4A6NHS7 340 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 TTLL13PA6NNM8 815 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 GALCP54803 685 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 OLFML2BQ68BL8 750 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 NAIF1Q69YI7 327 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 ZNF677Q86XU0 584 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 NPLOC4Q8TAT6 608 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 RIN2Q8WYP3 895 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 ZBTB45Q96K62 511 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 TINF2Q9BSI4 451 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 ABHD16BQ9H3Z7 469 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 IFT122Q9HBG6 1241 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 SUCLA2Q9P2R7 463 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 BHMG1C9JSJ3 638 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 NOP9Q86U38 636 aaKnown RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 GLYCTKQ8IVS8 523 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 KAT5Q92993 513 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 GDAP1L1Q96MZ0 367 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 MSTO1Q9BUK6 570 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 RBAKQ9NYW8 714 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 GNEQ9Y223 722 aaKnown RBP14.16□□□□□ -0.14
ACTN4-204ENST00000440400 TNFSF13BQ9Y275 285 aa14.16□□□□□ -0.14
ACTN4-204ENST00000440400 PRKCBP05771 671 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 MMP3P08254 477 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 SMPD1P17405 629 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 PAX7P23759 505 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 FMO1Q01740 532 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 CASP8Q14790 479 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 SURF1Q15526 300 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 ZBTB41Q5SVQ8 909 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 ZBTB8OSQ8IWT0 167 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 RASGEF1CQ8N431 466 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 NOA1Q8NC60 698 aaKnown RBP14.15□□□□□ -0.14
ACTN4-204ENST00000440400 COG1Q8WTW3 980 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 HES6Q96HZ4 224 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 CD248Q9HCU0 757 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 TTC7AQ9ULT0 858 aaPredicted RBP14.15□□□□□ -0.14
ACTN4-204ENST00000440400 OGTO15294 1046 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 SRGAP2O75044 1071 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 RTN2O75298 545 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 ZNF132P52740 706 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 CDR2Q01850 454 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 MARCH8Q5T0T0 291 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 C11orf63Q6NUN7 778 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 MPZL3Q6UWV2 235 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 SLC20A1Q8WUM9 679 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 PCDHB18PQ96TA0 734 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 ZNF408Q9H9D4 720 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 FAM169AQ9Y6X4 670 aa14.15□□□□□ -0.14
ACTN4-204ENST00000440400 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.14□□□□□ -0.15
ACTN4-204ENST00000440400 BUB1O43683 1085 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 TNFRSF8P28908 595 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 ACVR2BQ13705 512 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 C17orf99Q6UX52 265 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 TRMT1LQ7Z2T5 733 aaKnown RBP14.14□□□□□ -0.15
ACTN4-204ENST00000440400 SYCE1Q8N0S2 351 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 U2AF1L4Q8WU68 220 aaKnown RBP14.14□□□□□ -0.15
ACTN4-204ENST00000440400 L1RE1Q9UN81 338 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 Q9Y3F1 56 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 ZNF185O15231 689 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 B4GALT4O60513 344 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 RNF40O75150 1001 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 SGPL1O95470 568 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 CYP1A2P05177 515 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 SLC10A3P09131 477 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 MAP9Q49MG5 647 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 PALB2Q86YC2 1186 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 GPIHBP1Q8IV16 184 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 LMBR1Q8WVP7 490 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 CCDC127Q96BQ5 260 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
ACTN4-204ENST00000440400 FAM155AB1AL88 458 aaPredicted RBP14.14□□□□□ -0.15
ACTN4-204ENST00000440400 MYO1FO00160 1098 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms