RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SOCS7O14512 581 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 KIF1CO43896 1103 aaKnown RBP15.18■□□□□ 0.02
LIMD1-202ENST00000440097 HEXIM1O94992 359 aaKnown RBP15.18■□□□□ 0.02
LIMD1-202ENST00000440097 CAPSQ13938 189 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 TTLL4Q14679 1199 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 KIF22Q14807 665 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 EP400NLQ6ZTU2 488 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 TRAPPC12Q8WVT3 735 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 RBAKQ9NYW8 714 aaPredicted RBP15.18■□□□□ 0.02
LIMD1-202ENST00000440097 MCM8Q9UJA3 840 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 PAPPA2Q9BXP8 1791 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 DNAJC25-GNG10A0A024R161 153 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 E7EVH7 732 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 RASSF9O75901 435 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 SGPL1O95470 568 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 IGBP1P78318 339 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 PAK2Q13177 524 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 GLE1Q53GS7 698 aaKnown RBP15.18■□□□□ 0.02
LIMD1-202ENST00000440097 GJC2Q5T442 439 aaPredicted RBP15.18■□□□□ 0.02
LIMD1-202ENST00000440097 ZBTB33Q86T24 672 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 RNF149Q8NC42 400 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 TPCN2Q8NHX9 752 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 SLC30A5Q8TAD4 765 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 ATP6V1G3Q96LB4 118 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 RRAGCQ9HB90 399 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 KIAA1586Q9HCI6 787 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 SLC40A1Q9NP59 571 aa15.18■□□□□ 0.02
LIMD1-202ENST00000440097 MCM3APO60318 1980 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 BTNL10A8MVZ5 291 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 IBSPP21815 317 aaPredicted RBP15.17■□□□□ 0.02
LIMD1-202ENST00000440097 PPARDQ03181 441 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 EMC10Q5UCC4 262 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 SLFN12LQ6IEE8 588 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 SLC47A2Q86VL8 602 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 RHPN2Q8IUC4 686 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 SLC35G2Q8TBE7 412 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 PSPC1Q8WXF1 523 aaKnown RBP15.17■□□□□ 0.02
LIMD1-202ENST00000440097 VTI1AQ96AJ9 217 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 KREMEN1Q96MU8 473 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 THAP2Q9H0W7 228 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 CLDN3O15551 220 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 MAFO75444 373 aaPredicted RBP15.17■□□□□ 0.02
LIMD1-202ENST00000440097 CETPP11597 493 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 PIK3CAP42336 1068 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 TARBP2Q15633 366 aaKnown RBP15.17■□□□□ 0.02
LIMD1-202ENST00000440097 PREPLQ4J6C6 727 aaPredicted RBP15.17■□□□□ 0.02
LIMD1-202ENST00000440097 ARMCX2Q7L311 632 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 CD302Q8IX05 232 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 DHX38Q92620 1227 aaKnown RBP15.17■□□□□ 0.02
LIMD1-202ENST00000440097 TATDN2Q93075 761 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 NLRP4Q96MN2 994 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
LIMD1-202ENST00000440097 ASB14A6NK59 587 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 FAM107AO95990 144 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 FTLP02792 175 aaPredicted RBP15.16■□□□□ 0.02
LIMD1-202ENST00000440097 ADORA2AP29274 412 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 GPC3P51654 580 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 PLCB4Q15147 1175 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 WDR44Q5JSH3 913 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 ZBTB41Q5SVQ8 909 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 RFFLQ8WZ73 363 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 ZBTB10Q96DT7 871 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 PPANQ9NQ55 473 aaKnown RBP15.16■□□□□ 0.02
LIMD1-202ENST00000440097 MKI67P46013 3256 aaKnown RBP15.16■□□□□ 0.02
LIMD1-202ENST00000440097 ADCY3O60266 1144 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 CEP104O60308 925 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 ELF1P32519 619 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 HPDP32754 393 aaPredicted RBP15.16■□□□□ 0.02
LIMD1-202ENST00000440097 GTF2H1P32780 548 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 PDE6CP51160 858 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 CEP85LQ5SZL2 805 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 MAATS1Q7Z4T9 603 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 ZBTB8OSQ8IWT0 167 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 SYCE1Q8N0S2 351 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 MREGQ8N565 214 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 CASKIN2Q8WXE0 1202 aa15.16■□□□□ 0.02
LIMD1-202ENST00000440097 TACO1Q9BSH4 297 aaKnown RBP15.16■□□□□ 0.02
LIMD1-202ENST00000440097 BTBD19C9JJ37 291 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 SCP2P22307 547 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 LAMTOR4Q0VGL1 99 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 PRPF4BQ13523 1007 aaKnown RBP15.15■□□□□ 0.02
LIMD1-202ENST00000440097 TRADDQ15628 312 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 C6orf89Q6UWU4 347 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 EPS8L1Q8TE68 723 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 CTTNBP2NLQ9P2B4 639 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 CHORDC1Q9UHD1 332 aaPredicted RBP15.15■□□□□ 0.02
LIMD1-202ENST00000440097 ANKRD62A6NC57 917 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 HMGB1P1B2RPK0 211 aaPredicted RBP15.15■□□□□ 0.02
LIMD1-202ENST00000440097 PMM2O15305 246 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 KIF4AO95239 1232 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 LDHAP00338 332 aaKnown RBP15.15■□□□□ 0.02
LIMD1-202ENST00000440097 GJB1P08034 283 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 GTF2A2P52657 109 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 IER5Q5VY09 327 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms