RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CXCL8P10145 99 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 MYBP10242 640 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 TNFSF9P41273 254 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 CLCNKBP51801 687 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 CASP5P51878 434 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 KYAT1Q16773 422 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 USP41Q3LFD5 358 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 ZBTB41Q5SVQ8 909 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 KIAA1841Q6NSI8 718 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 SLC22A17Q8WUG5 538 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 UROC1Q96N76 676 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 MSTO1Q9BUK6 570 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 FGFBP2Q9BYJ0 223 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 MAGEF1Q9HAY2 307 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 IGFBP6P24592 240 aaPredicted RBP25.78■■□□□ 1.72
VARS-217ENST00000440048 KCNA1Q09470 495 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 SMAD2Q15796 467 aaKnown RBP25.78■■□□□ 1.72
VARS-217ENST00000440048 UPP1Q16831 310 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 L1TD1Q5T7N2 865 aaKnown RBP25.78■■□□□ 1.72
VARS-217ENST00000440048 ADALQ6DHV7 355 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 CNNM4Q6P4Q7 775 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 SYCE2Q6PIF2 218 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 DCLRE1AQ6PJP8 1040 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 PPFIBP1Q86W92 1011 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 C18orf25Q96B23 403 aaPredicted RBP25.78■■□□□ 1.72
VARS-217ENST00000440048 C7orf25Q9BPX7 421 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 PLEKHA5Q9HAU0 1116 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 RXFP1Q9HBX9 757 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 PCDHB13Q9Y5F0 798 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 STYXL1Q9Y6J8 313 aa25.78■■□□□ 1.72
VARS-217ENST00000440048 VWA8A3KMH1 1905 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 TTC26A0AVF1 554 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 TMEM189-UBE2V1I3L0A0 370 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 B3GAT3O94766 335 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 EPCAMP16422 314 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 CMA1P23946 247 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 KLRC2P26717 231 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 ASIC1P78348 528 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 SLFN12LQ6IEE8 588 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 CD300LGQ6UXG3 332 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 ACCSQ96QU6 501 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 PYM1Q9BRP8 204 aaKnown RBP25.77■■□□□ 1.72
VARS-217ENST00000440048 SCAND2PQ9GZW5 306 aaPredicted RBP25.77■■□□□ 1.72
VARS-217ENST00000440048 S1PR5Q9H228 398 aa25.77■■□□□ 1.72
VARS-217ENST00000440048 A0A1B0GVL5 298 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 HOXB8P17481 243 aaPredicted RBP25.76■■□□□ 1.71
VARS-217ENST00000440048 ALCAMQ13740 583 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 ENOX2Q16206 610 aaKnown RBP25.76■■□□□ 1.71
VARS-217ENST00000440048 FAM171A1Q5VUB5 890 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 GPR65Q8IYL9 337 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 C3orf58Q8NDZ4 430 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 RIN2Q8WYP3 895 aaPredicted RBP25.76■■□□□ 1.71
VARS-217ENST00000440048 HPS3Q969F9 1004 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 DDX27Q96GQ7 796 aaKnown RBP25.76■■□□□ 1.71
VARS-217ENST00000440048 APOL5Q9BWW9 433 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 RPF1Q9H9Y2 349 aaKnown RBP25.76■■□□□ 1.71
VARS-217ENST00000440048 PRKAG3Q9UGI9 489 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 EXOC7Q9UPT5 735 aa25.76■■□□□ 1.71
VARS-217ENST00000440048 USP15Q9Y4E8 981 aaPredicted RBP25.76■■□□□ 1.71
VARS-217ENST00000440048 PLXNA3P51805 1871 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 LACTBL1A8MY62 500 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 TEX28O15482 410 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 PFKFB1P16118 471 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 CASP1P29466 404 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 CLCN4P51793 760 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 NUCB2P80303 420 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 SPAG1Q07617 926 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 ELAVL2Q12926 359 aaKnown RBP25.75■■□□□ 1.71
VARS-217ENST00000440048 RTP2Q5QGT7 225 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 TTPALQ9BTX7 342 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 SERTAD1Q9UHV2 236 aa25.75■■□□□ 1.71
VARS-217ENST00000440048 CPSF3Q9UKF6 684 aaKnown RBP25.75■■□□□ 1.71
VARS-217ENST00000440048 AGO2Q9UKV8 859 aaKnown RBP25.75■■□□□ 1.71
VARS-217ENST00000440048 ANK1P16157 1881 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 PODXLO00592 558 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 PRPF6O94906 941 aaKnown RBP25.74■■□□□ 1.71
VARS-217ENST00000440048 ADH1AP07327 375 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 ADRB2P07550 413 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 SLFN14P0C7P3 912 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 ADSSP30520 456 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 AFMP43652 599 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 PPP2R3AQ06190 1150 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 TPRNQ4KMQ1 711 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 CEP57L1Q8IYX8 460 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 C1QTNF1Q9BXJ1 281 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 BLZF1Q9H2G9 400 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 CD320Q9NPF0 282 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.74■■□□□ 1.71
VARS-217ENST00000440048 DZANK1Q9NVP4 752 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 HPSEQ9Y251 543 aa25.74■■□□□ 1.71
VARS-217ENST00000440048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.73■■□□□ 1.71
VARS-217ENST00000440048 ACTN4O43707 911 aaKnown RBP25.73■■□□□ 1.71
VARS-217ENST00000440048 RPL9P32969 192 aaKnown RBP25.73■■□□□ 1.71
VARS-217ENST00000440048 ACOT2P49753 483 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 ZP2Q05996 745 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 POSTNQ15063 836 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 ZBTB6Q15916 424 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 PRSS55Q6UWB4 352 aaPredicted RBP25.73■■□□□ 1.71
VARS-217ENST00000440048 UNC13DQ70J99 1090 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 CEP57Q86XR8 500 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms