RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RIPOR3Q96MK2 946 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 NECTIN4Q96NY8 510 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 NECAB3Q96P71 396 aaPredicted RBP11.41□□□□□ -0.58
MCF2L-216ENST00000439475 FIZ1Q96SL8 496 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 GPR62Q9BZJ7 368 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 RXFP1Q9HBX9 757 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 KBTBD4Q9NVX7 518 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 CNTN3Q9P232 1028 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 FNIP2Q9P278 1114 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 USP25Q9UHP3 1055 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 UBQLN1Q9UMX0 589 aaKnown RBP11.41□□□□□ -0.58
MCF2L-216ENST00000439475 NUB1Q9Y5A7 615 aa11.41□□□□□ -0.58
MCF2L-216ENST00000439475 BRWD1Q9NSI6 2320 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 A0A0B4J269 797 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 FRMD3A2A2Y4 597 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 KIF4AO95239 1232 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 EFEMP2O95967 443 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 GLUD1P00367 558 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 CYP3A5P20815 502 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 MTHFRP42898 656 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 CLCNKBP51801 687 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 ASIC1P78348 528 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 NAB2Q15742 525 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 E2F4Q16254 413 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 UPP1Q16831 310 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 SEZ6Q53EL9 994 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 L1TD1Q5T7N2 865 aaKnown RBP11.4□□□□□ -0.58
MCF2L-216ENST00000439475 RESP18Q5W5W9 173 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 SYCE2Q6PIF2 218 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-216ENST00000439475 ADHFE1Q8IWW8 467 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 VN1R2Q8NFZ6 395 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 HASPINQ8TF76 798 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 SLC22A17Q8WUG5 538 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 HDAC7Q8WUI4 952 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 POMGNT1Q8WZA1 660 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 KIF12Q96FN5 646 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 CCDC34Q96HJ3 373 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 FBXL18Q96ME1 805 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 C7orf25Q9BPX7 421 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 PAAF1Q9BRP4 392 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 PHF7Q9BWX1 381 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-216ENST00000439475 VN1R3Q9BXE9 311 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 TRIM9Q9C026 710 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 ADAM7Q9H2U9 754 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 TBC1D7Q9P0N9 293 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 AGO2Q9UKV8 859 aaKnown RBP11.4□□□□□ -0.58
MCF2L-216ENST00000439475 KCNH3Q9ULD8 1083 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 ZDHHC9Q9Y397 364 aa11.4□□□□□ -0.58
MCF2L-216ENST00000439475 USP15Q9Y4E8 981 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-216ENST00000439475 TTC26A0AVF1 554 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 PODXLO00592 558 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 KIAA0391O15091 583 aaKnown RBP11.39□□□□□ -0.59
MCF2L-216ENST00000439475 TEX28O15482 410 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 CXCL8P10145 99 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 EPCAMP16422 314 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 PAX3P23760 479 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 CMA1P23946 247 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 CLCN4P51793 760 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 RBM10P98175 930 aaKnown RBP11.39□□□□□ -0.59
MCF2L-216ENST00000439475 CBX2Q14781 532 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-216ENST00000439475 CYP26C1Q6V0L0 522 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 ANKS3Q6ZW76 656 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 UNC13DQ70J99 1090 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 BEST2Q8NFU1 509 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 LEO1Q8WVC0 666 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-216ENST00000439475 PIK3R5Q8WYR1 880 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 ZMAT2Q96NC0 199 aaKnown RBP11.39□□□□□ -0.59
MCF2L-216ENST00000439475 S1PR5Q9H228 398 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 CXCL16Q9H2A7 254 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 PLEKHA4Q9H4M7 779 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 ASB7Q9H672 318 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 SFXN1Q9H9B4 322 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 CACNG4Q9UBN1 327 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 CPSF3Q9UKF6 684 aaKnown RBP11.39□□□□□ -0.59
MCF2L-216ENST00000439475 STYXL1Q9Y6J8 313 aa11.39□□□□□ -0.59
MCF2L-216ENST00000439475 COL6A3P12111 3177 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 ARHGEF37A1IGU5 675 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 GOLGA6L4A6NEF3 574 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 LACTBL1A8MY62 500 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 ANKRD63C9JTQ0 380 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 F8W810 466 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 H7C4K7 107 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 SYN3O14994 580 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 PPP1R37O75864 691 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 ALADP13716 330 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 GARTP22102 1010 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 TNFSF9P41273 254 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 AFMP43652 599 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 PSMD5Q16401 504 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 RARS2Q5T160 578 aaKnown RBP11.38□□□□□ -0.59
MCF2L-216ENST00000439475 CNNM4Q6P4Q7 775 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 PALB2Q86YC2 1186 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 NT5DC4Q86YG4 428 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 LNX1Q8TBB1 728 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-216ENST00000439475 SUSD6Q92537 303 aa11.38□□□□□ -0.59
MCF2L-216ENST00000439475 CCDC47Q96A33 483 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms