RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SLC12A3P55017 1021 aa20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 UPP1Q16831 310 aa20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 BRAPQ7Z569 592 aa20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 NTPCRQ9BSD7 190 aaKnown RBP20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 IRF2BPLQ9H1B7 796 aa20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 EPS15L1Q9UBC2 864 aa20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 POLIQ9UNA4 740 aa20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 DUSP12Q9UNI6 340 aa20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 SLC26A4O43511 780 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 XYLBO75191 536 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 TOM1L1O75674 476 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 C8AP07357 584 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 HNRNPA1P09651 372 aaKnown RBP eCLIP20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 FGFR3P22607 806 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 OR1D2P34982 312 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 NUBP1P53384 320 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 NOLC1Q14978 699 aaKnown RBP eCLIP20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 TMEM119Q4V9L6 283 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 ANKS3Q6ZW76 656 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 FLCNQ8NFG4 579 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 BICD1Q96G01 975 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 SNX27Q96L92 541 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 MYADMQ96S97 322 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 MTRRQ9UBK8 725 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 VWA8A3KMH1 1905 aa20.19■□□□□ 0.82
AC004540.1-201ENST00000439120 VPS37CA5D8V6 355 aaPredicted RBP20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 PODXLO00592 558 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 PAPLNO95428 1278 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 KRT18P05783 430 aaKnown RBP20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 RFX1P22670 979 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 PROZP22891 400 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 FSHRP23945 695 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 TKTP29401 623 aaKnown RBP20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 CACNB1Q02641 598 aaPredicted RBP20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 TCF15Q12870 199 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 DHX8Q14562 1220 aaKnown RBP20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 ASTLQ6HA08 431 aaPredicted RBP20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 ALKAL1Q6UXT8 129 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 TMEM161BQ8NDZ6 487 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 SLC7A14Q8TBB6 771 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 NXPE3Q969Y0 559 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 NUB1Q9Y5A7 615 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 CDY1Q9Y6F8 540 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 ZDBF2Q9HCK1 2354 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 CITO14578 2027 aa20.18■□□□□ 0.82
AC004540.1-201ENST00000439120 NPHP3-ACAD11A0A0J9YXS1 232 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 I3L4J1 428 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 CCL16O15467 120 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 CLDN3O15551 220 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 ADAM12O43184 909 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 MAPTP10636 758 aaKnown RBP20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 KCNE1P15382 129 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 HOXA9P31269 272 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 BRCC3P46736 316 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 SOX4Q06945 474 aaPredicted RBP20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 RAB33AQ14088 237 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 XKR4Q5GH76 650 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 AXDND1Q5T1B0 1012 aaPredicted RBP20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 ZPBP2Q6X784 338 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 GRASPQ7Z6J2 395 aaPredicted RBP20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 GPBP1Q86WP2 473 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 C3orf58Q8NDZ4 430 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 RSAD2Q8WXG1 361 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 ZBTB45Q96K62 511 aaPredicted RBP20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 CNTN3Q9P232 1028 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 ODF2LQ9ULJ1 636 aa20.17■□□□□ 0.82
AC004540.1-201ENST00000439120 ABLIM1O14639 778 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 FAM13AO94988 1023 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 LAMP2P13473 410 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 PDCP20941 246 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 IGFBP6P24592 240 aaPredicted RBP20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 RPL9P32969 192 aaKnown RBP20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 LONP1P36776 959 aaKnown RBP20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 CLCN5P51795 746 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 SIX5Q8N196 739 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 TMEM105Q8N8V8 129 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 ATOH1Q92858 354 aaPredicted RBP20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 ZMAT2Q96NC0 199 aaKnown RBP20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 BACE2Q9Y5Z0 518 aa20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 ZFP37Q9Y6Q3 630 aaPredicted RBP20.16■□□□□ 0.82
AC004540.1-201ENST00000439120 STK25O00506 426 aa20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 GALR2O43603 387 aaPredicted RBP20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 NARSO43776 548 aaKnown RBP20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 CFHP08603 1231 aa20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 LIG4P49917 911 aa20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 SF3A1Q15459 793 aaKnown RBP20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 SEZ6Q53EL9 994 aa20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 HAUS6Q7Z4H7 955 aa20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 MYCT1Q8N699 235 aa20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 C18orf25Q96B23 403 aaPredicted RBP20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 REEP2Q9BRK0 252 aa20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 ZHX3Q9H4I2 956 aa20.15■□□□□ 0.82
AC004540.1-201ENST00000439120 H0Y858 1186 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 H7C4K7 107 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 K7ENM7 598 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 HNRNPDLO14979 420 aaKnown RBP20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 TBCAO75347 108 aaKnown RBP20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 SRFP11831 508 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms