RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FAM107BQ9H098 131 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 CTTNBP2NLQ9P2B4 639 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 P4HA2O15460 535 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 CYP26A1O43174 497 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 OPA1O60313 960 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 GLRA2P23416 452 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 ZNF157P51786 506 aaPredicted RBP14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 SLC39A4Q6P5W5 647 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 PAXIP1Q6ZW49 1069 aaPredicted RBP14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 SLC47A2Q86VL8 602 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 RASAL3Q86YV0 1011 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 KREMEN1Q96MU8 473 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 DIS3Q9Y2L1 958 aaKnown RBP14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 HNRNPDLO14979 420 aaKnown RBP14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 DDX3YO15523 660 aaKnown RBP14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 TTI1O43156 1089 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 ECM2O94769 699 aaPredicted RBP14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 DLATP10515 647 aaKnown RBP14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 ECHS1P30084 290 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 ARL2P36404 184 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 SKOR1P84550 965 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 GRB14Q14449 540 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 TAPT1Q6NXT6 567 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 DPP9Q86TI2 863 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 NOP9Q86U38 636 aaKnown RBP14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 EPS8L1Q8TE68 723 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 POMGNT1Q8WZA1 660 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 PCDHB18PQ96TA0 734 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 CPA4Q9UI42 421 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 USP20Q9Y2K6 914 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 LRRIQ4A6NIV6 560 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 H0YCG3 227 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 IBSPP21815 317 aaPredicted RBP14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 AADACL2Q6P093 401 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 PLEKHH3Q7Z736 793 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 PARD3BQ8TEW8 1205 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 WHAMMQ8TF30 809 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 PIK3R5Q8WYR1 880 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 ALG3Q92685 438 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 BICD1Q96G01 975 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 JPH2Q9BR39 696 aaPredicted RBP14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 ISCUQ9H1K1 167 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 NEUROG2Q9H2A3 272 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 CD248Q9HCU0 757 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 VTA1Q9NP79 307 aa14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.89□□□□□ -0.03
PTCHD3-201ENST00000438700 SIP14410 1827 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 H0YHG0 523 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 IGF2BP3O00425 579 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 LSP1P33241 339 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 ARHGAP1Q07960 439 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 DRP2Q13474 957 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 PLPPR4Q7Z2D5 763 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 ZNF467Q7Z7K2 595 aaPredicted RBP14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 IQCKQ8N0W5 287 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 CNPY4Q8N129 248 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 OTUD6BQ8N6M0 293 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 DEPTORQ8TB45 409 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 TAS1R2Q8TE23 839 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 ATP8B4Q8TF62 1192 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 TRIM31Q9BZY9 425 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 CCDC188H7C350 402 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 DAPK3O43293 454 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 MAFO75444 373 aaPredicted RBP14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 MMEP08473 750 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 NAMPTP43490 491 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 MARCKSL1P49006 195 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 PLCB4Q15147 1175 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 KRT39Q6A163 491 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 DHX38Q92620 1227 aaKnown RBP14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 NOCTQ9UK39 431 aaKnown RBP14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 DAAM1Q9Y4D1 1078 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 ALG6Q9Y672 507 aa14.88□□□□□ -0.03
PTCHD3-201ENST00000438700 ZBTB42B2RXF5 422 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 MAPK13O15264 365 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 SNAI1O95863 264 aaPredicted RBP14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 CALCAP01258 141 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 CHRNB2P17787 502 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 MAPK4P31152 587 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 ADCYAP1R1P41586 468 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 BRDTQ58F21 947 aaPredicted RBP14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 RHOT2Q8IXI1 618 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 FAM71AQ8IYT1 594 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 KRT35Q92764 455 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 MAML3Q96JK9 1138 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 TRIM51Q9BSJ1 452 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 PI4K2AQ9BTU6 479 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 KATNBL1Q9H079 304 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 DPH5Q9H2P9 285 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 KCNG1Q9UIX4 513 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 TRPC6Q9Y210 931 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 PCNTO95613 3336 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 DOCK3Q8IZD9 2030 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 MEFVO15553 781 aaPredicted RBP14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 FLT3P36888 993 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 GSCP56915 257 aaPredicted RBP14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 STRN3Q13033 797 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 CAPSQ13938 189 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 MAMDC4Q6UXC1 1216 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 MAATS1Q7Z4T9 603 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms