RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 YME1L1Q96TA2 773 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 RAD9AQ99638 391 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 ZBED2Q9BTP6 218 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 PRO3102Q9H379 93 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 KLK14Q9P0G3 267 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 PTGESO14684 152 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 TNNI1P19237 187 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 SCNN1GP51170 649 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 ZBTB6Q15916 424 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 TRIM59Q8IWR1 403 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 BEST2Q8NFU1 509 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 CCDC127Q96BQ5 260 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 KIF12Q96FN5 646 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 ANKRD36BP1Q96IX9 119 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 UROC1Q96N76 676 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 PPP1R10Q96QC0 940 aaKnown RBP19.93■□□□□ 0.78
HDAC6-208ENST00000438518 PDE11AQ9HCR9 933 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 FANCLQ9NW38 375 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 INPP5FQ9Y2H2 1132 aa19.93■□□□□ 0.78
HDAC6-208ENST00000438518 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-208ENST00000438518 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-208ENST00000438518 TBKBP1A7MCY6 615 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 KCNJ18B7U540 433 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 MEFVO15553 781 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-208ENST00000438518 TLL1O43897 1013 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 TPM2P07951 284 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 TMEM191BP0C7N4 346 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 DLATP10515 647 aaKnown RBP19.92■□□□□ 0.78
HDAC6-208ENST00000438518 ZNF18P17022 549 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 TUSC3Q13454 348 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 KCNJ12Q14500 433 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 DUOXA2Q1HG44 320 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 TCP11X2Q5H9J9 407 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 JADE1Q6IE81 842 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 IRF2BP1Q8IU81 584 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 SP7Q8TDD2 431 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-208ENST00000438518 FAM193BQ96PV7 902 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-208ENST00000438518 TMEM175Q9BSA9 504 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 SAMSN1Q9NSI8 373 aaKnown RBP19.92■□□□□ 0.78
HDAC6-208ENST00000438518 TBC1D13Q9NVG8 400 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 INTS13Q9NVM9 706 aa19.92■□□□□ 0.78
HDAC6-208ENST00000438518 GBF1Q92538 1859 aa19.91■□□□□ 0.78
HDAC6-208ENST00000438518 LRRIQ3A6PVS8 624 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-208ENST00000438518 N4BP1O75113 896 aaKnown RBP19.91■□□□□ 0.78
HDAC6-208ENST00000438518 POMCP01189 267 aa19.91■□□□□ 0.78
HDAC6-208ENST00000438518 TNNC2P02585 160 aa19.91■□□□□ 0.78
HDAC6-208ENST00000438518 PAX3P23760 479 aa19.91■□□□□ 0.78
HDAC6-208ENST00000438518 RNASELQ05823 741 aaKnown RBP19.91■□□□□ 0.78
HDAC6-208ENST00000438518 BTG3Q14201 252 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-208ENST00000438518 MAN2A1Q16706 1144 aa19.91■□□□□ 0.78
HDAC6-208ENST00000438518 EFCAB13Q8IY85 973 aa19.91■□□□□ 0.78
HDAC6-208ENST00000438518 DDX27Q96GQ7 796 aaKnown RBP19.91■□□□□ 0.78
HDAC6-208ENST00000438518 ZMAT2Q96NC0 199 aaKnown RBP19.91■□□□□ 0.78
HDAC6-208ENST00000438518 RWDD3Q9Y3V2 267 aa19.91■□□□□ 0.78
HDAC6-208ENST00000438518 PCDHA11Q9Y5I1 949 aa19.91■□□□□ 0.78
HDAC6-208ENST00000438518 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.91■□□□□ 0.78
HDAC6-208ENST00000438518 PMM2O15305 246 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 NFICP08651 508 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 CDK11BP21127 795 aaKnown RBP19.9■□□□□ 0.78
HDAC6-208ENST00000438518 LRPAP1P30533 357 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 RPL9P32969 192 aaKnown RBP19.9■□□□□ 0.78
HDAC6-208ENST00000438518 MTIF2P46199 727 aaKnown RBP19.9■□□□□ 0.78
HDAC6-208ENST00000438518 DSC1Q08554 894 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 NAB2Q15742 525 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 RAB30Q15771 203 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 DCAF17Q5H9S7 520 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-208ENST00000438518 GLRA4Q5JXX5 417 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 PRPF38BQ5VTL8 546 aaKnown RBP19.9■□□□□ 0.78
HDAC6-208ENST00000438518 TCERG1LQ5VWI1 586 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 FAM117BQ6P1L5 589 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 CHRDL2Q6WN34 429 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 LUZP1Q86V48 1076 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 SLC35C1Q96A29 364 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 ITGA11Q9UKX5 1188 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 PDE4DIPQ5VU43 2346 aa19.9■□□□□ 0.78
HDAC6-208ENST00000438518 RBAK-RBAKDNI3L0D1 243 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 P4HA2O15460 535 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 LAG3P18627 525 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 WNT7BP56706 349 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 TFAMQ00059 246 aaKnown RBP19.89■□□□□ 0.77
HDAC6-208ENST00000438518 CETN1Q12798 172 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 KRT39Q6A163 491 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 FIBCD1Q8N539 461 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 PLEKHO2Q8TD55 490 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 TUBGCP2Q9BSJ2 902 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 HSD3B7Q9H2F3 369 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 TMEM8AQ9HCN3 771 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 AAASQ9NRG9 546 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 MIOSQ9NXC5 875 aa19.89■□□□□ 0.77
HDAC6-208ENST00000438518 LIMA1Q9UHB6 759 aaKnown RBP19.89■□□□□ 0.77
HDAC6-208ENST00000438518 R3HCC1Q9Y3T6 440 aaKnown RBP19.89■□□□□ 0.77
HDAC6-208ENST00000438518 KIAA1671Q9BY89 1806 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 LRRC10BA6NIK2 292 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 AFPP02771 609 aaKnown RBP19.88■□□□□ 0.77
HDAC6-208ENST00000438518 GATMP50440 423 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 MXI1P50539 228 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 AFF1P51825 1210 aaKnown RBP19.88■□□□□ 0.77
HDAC6-208ENST00000438518 DLG4P78352 724 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 ZACNQ401N2 412 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 TMCO2Q7Z6W1 182 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms