RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 PDHA1P08559 390 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 GTF2H1P32780 548 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 KRT76Q01546 638 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 CPNE8Q86YQ8 564 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 RTKN2Q8IZC4 609 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 RNF169Q8NCN4 708 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 SLC13A1Q9BZW2 595 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 MIS12Q9H081 205 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 AGO4Q9HCK5 861 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 CSADQ9Y600 493 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 UBE4BO95155 1302 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 TOM1L1O75674 476 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 SLC8A1P32418 973 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 ZNF568Q3ZCX4 644 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 RBBP8NLQ8NC74 664 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 MT-ND3P03897 115 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 EMC2Q15006 297 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 UGCGQ16739 394 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 RBM15Q96T37 977 aaKnown RBP eCLIP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 SMYD2Q9NRG4 433 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 MYH6P13533 1939 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 TXNDC9O14530 226 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 ADRB2P07550 413 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 RRM1P23921 792 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 HOXA7P31268 230 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 GPC3P51654 580 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 CENPUQ71F23 418 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 NSUN6Q8TEA1 469 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 NPHS2Q9NP85 383 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 OPLAHO14841 1288 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 RXRBP28702 533 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 RGS7P49802 495 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 PSMC1P62191 440 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 C1orf186Q6ZWK4 172 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 RHOT1Q8IXI2 618 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 SLC17A8Q8NDX2 589 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 PCDHGC5Q9Y5F6 944 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 VIL1P09327 827 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 ETS1P14921 441 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 DPEP1P16444 411 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 CIITAP33076 1130 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 RNF149Q8NC42 400 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 LRRN4Q8WUT4 740 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 GMCL1Q96IK5 515 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 FERMT1Q9BQL6 677 aa12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 TARS2Q9BW92 718 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 MOV10L1Q9BXT6 1211 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 CDC42EP4Q9H3Q1 356 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-206ENST00000437932 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 TGFB1I1O43294 461 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 ENTPD3O75355 529 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 BANF1O75531 89 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 NR3C2P08235 984 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 STXBP2Q15833 593 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 DALRD3Q5D0E6 543 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 CEP128Q6ZU80 1094 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 UBA3Q8TBC4 463 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 ETNK1Q9HBU6 452 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 SLC24A3Q9HC58 644 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 TMEM8AQ9HCN3 771 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 MYH7P12883 1935 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 ARL1P40616 181 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 OVGP1Q12889 678 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 BYSLQ13895 437 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 SH3BP5LQ7L8J4 393 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 HIPK4Q8NE63 616 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 ATXN7L3BQ96GX2 97 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 ZBTB45Q96K62 511 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 PPP1R36Q96LQ0 422 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 RPF1Q9H9Y2 349 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 MYOZ2Q9NPC6 264 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 FIS1Q9Y3D6 152 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 PEX10O60683 326 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 TAF11Q15544 211 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 DACT2Q5SW24 774 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 SPATA21Q7Z572 469 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 CCNYQ8ND76 341 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 CYTH2Q99418 400 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 DNAJC18Q9H819 358 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 COG5Q9UP83 839 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 NEU2Q9Y3R4 380 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 NUP98P52948 1817 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 RARAP10276 462 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 SCTRP47872 440 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 RASSF2P50749 326 aa12.36□□□□□ -0.43
PDLIM5-206ENST00000437932 ACAD10Q6JQN1 1059 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms