RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 B4GALT3O60512 393 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 GJB5O95377 273 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 KRT13P13646 458 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 ZNF18P17022 549 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 TNNI1P19237 187 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 RABGGTBP53611 331 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 TFAMQ00059 246 aaKnown RBP18.2■□□□□ 0.5
CALD1-209ENST00000436461 XKR4Q5GH76 650 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 TCP11X2Q5H9J9 407 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 FAM43BQ6ZT52 329 aaPredicted RBP18.2■□□□□ 0.5
CALD1-209ENST00000436461 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
CALD1-209ENST00000436461 FRMD5Q7Z6J6 570 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 HERC6Q8IVU3 1022 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 ZNF516Q92618 1163 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 MTIF3Q9H2K0 278 aaKnown RBP18.2■□□□□ 0.5
CALD1-209ENST00000436461 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 UBN1Q9NPG3 1134 aa18.2■□□□□ 0.5
CALD1-209ENST00000436461 GOLGA6L19H0YKK7 550 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 IL18RAPO95256 599 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 GNA14O95837 355 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 MTIF2P46199 727 aaKnown RBP18.19■□□□□ 0.5
CALD1-209ENST00000436461 SOX4Q06945 474 aaPredicted RBP18.19■□□□□ 0.5
CALD1-209ENST00000436461 NOMO2Q5JPE7 1267 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 ZNF280BQ86YH2 543 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 TRIM59Q8IWR1 403 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 RABGGTAQ92696 567 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 PPP1R10Q96QC0 940 aaKnown RBP18.19■□□□□ 0.5
CALD1-209ENST00000436461 SLC9A7Q96T83 725 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 YME1L1Q96TA2 773 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 ZBED2Q9BTP6 218 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 MTMR12Q9C0I1 747 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 ASB7Q9H672 318 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 RC3H2Q9HBD1 1191 aaKnown RBP18.19■□□□□ 0.5
CALD1-209ENST00000436461 TBC1D13Q9NVG8 400 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 TAB2Q9NYJ8 693 aa18.19■□□□□ 0.5
CALD1-209ENST00000436461 MAGEC2Q9UBF1 373 aaPredicted RBP18.19■□□□□ 0.5
CALD1-209ENST00000436461 KIAA1671Q9BY89 1806 aa18.18■□□□□ 0.5
CALD1-209ENST00000436461 DDHD2O94830 711 aa18.18■□□□□ 0.5
CALD1-209ENST00000436461 MARSP56192 900 aaKnown RBP18.18■□□□□ 0.5
CALD1-209ENST00000436461 PPP3CAQ08209 521 aa18.18■□□□□ 0.5
CALD1-209ENST00000436461 TMEM132DQ14C87 1099 aa18.18■□□□□ 0.5
CALD1-209ENST00000436461 FAM114A1Q8IWE2 563 aa18.18■□□□□ 0.5
CALD1-209ENST00000436461 SLC35C1Q96A29 364 aa18.18■□□□□ 0.5
CALD1-209ENST00000436461 ZNF689Q96CS4 500 aaPredicted RBP18.18■□□□□ 0.5
CALD1-209ENST00000436461 CGRRF1Q99675 332 aa18.18■□□□□ 0.5
CALD1-209ENST00000436461 TMEM117Q9H0C3 514 aa18.18■□□□□ 0.5
CALD1-209ENST00000436461 METTL14Q9HCE5 456 aaKnown RBP18.18■□□□□ 0.5
CALD1-209ENST00000436461 LCHNA4D1U4 455 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 CASTOR2A6NHX0 329 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 HOXA2O43364 376 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 THP07101 528 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 PRKCSHP14314 528 aaPredicted RBP18.17■□□□□ 0.5
CALD1-209ENST00000436461 MYOGP15173 224 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 KCNE1P15382 129 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 CDK11BP21127 795 aaKnown RBP18.17■□□□□ 0.5
CALD1-209ENST00000436461 GCLMP48507 274 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 KRT31Q15323 416 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 NAB2Q15742 525 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 URGCPQ8TCY9 931 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 TMC2Q8TDI7 906 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 PAAF1Q9BRP4 392 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 INTS13Q9NVM9 706 aa18.17■□□□□ 0.5
CALD1-209ENST00000436461 CDH23Q9H251 3354 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 INPPL1O15357 1258 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 TLL1O43897 1013 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 TMEM191BP0C7N4 346 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 IGFBP6P24592 240 aaPredicted RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 PBX3P40426 434 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 POU5F1Q01860 360 aaKnown RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 RNASELQ05823 741 aaKnown RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 GRIK3Q13003 919 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 ZBTB6Q15916 424 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 CBWD6Q4V339 395 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 CBWD3Q5JTY5 395 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 CBWD5Q5RIA9 395 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 WDR49Q8IV35 697 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 CD302Q8IX05 232 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 PHOSPHO2Q8TCD6 241 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 ELMO3Q96BJ8 720 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 TUBGCP2Q9BSJ2 902 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 VPS16Q9H269 839 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 DNAJB4Q9UDY4 337 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 C2CD2Q9Y426 696 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.16■□□□□ 0.5
CALD1-209ENST00000436461 EEF1GP26641 437 aaKnown RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 BMP8BP34820 402 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 HTRA4P83105 476 aaPredicted RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 KCNH2Q12809 1159 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 BTG3Q14201 252 aaPredicted RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 HSP90AA2PQ14568 343 aaPredicted RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 SURF1Q15526 300 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 TDRD10Q5VZ19 366 aaKnown RBP18.16■□□□□ 0.5
CALD1-209ENST00000436461 TDHQ8IZJ6 230 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 NRDE2Q9H7Z3 1164 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.16■□□□□ 0.5
CALD1-209ENST00000436461 SCN1AP35498 2009 aa18.16■□□□□ 0.5
CALD1-209ENST00000436461 F8W810 466 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 PES1O00541 588 aaKnown RBP18.15■□□□□ 0.5
CALD1-209ENST00000436461 PPEF2O14830 753 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms